KEGG   Rosa chinensis (China rose): 112182848
Entry
112182848         CDS       T06020                                 
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rcn03036]
    112182848
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rcn04812]
    112182848
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     112182848
   Microtubules and associated factors
    gamma-tubulin ring complex
     112182848
Cytoskeleton proteins [BR:rcn04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     112182848
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40 WDR55 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_1st WD40_RFWD3 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IFT122_1st NYD-SP28_assoc bZIP_2 PsbK YabA
Other DBs
NCBI-GeneID: 112182848
NCBI-ProteinID: XP_024177168
LinkDB
Position
1:complement(58684326..58688959)
AA seq 793 aa
MNIVDPSVTLLAASGGDTVKLFDVSVKSGDPCVSSYIPSPGCHVNSVKWNHTNLVVVSAG
DDKKISLWHKNGQSLGTIPVAGTDSGDNIEESISALSFSNKVSRYICSGGSGQVVRIWDL
QRKRCIKWLRGHSSTITGAAYNCKDEHLASISLSGDLIIHNLASSTRTTEFKDPNGQVLR
VLDYSRISRHLLVTAGDDGSVHLWDTTGRSPKISWLKQHSAPTAGISFSPSNDKMFASVG
LDKKLYTYDSGSRRHSSCISYEAPFSALAFRDDGWVLAAGTSSGRVVFYDVRGKPEPFTV
LRAYNSSEAVTSLCWQRSKPVVVNESSCSVETALLGDAVEDSILMPDPLPSVTSSNLSLS
MAVSSSRNPGRSGLSADTFSVTATGSGLASTTLNVSTAEDTPHRGHLWPGGTLSRLHAPR
STFNFKDDMEVFSPLVDVHPITPTLDKLWDDHDRSKKDSVDKKPSSLLFPSSSRRFPLAE
DVSSDHPIFDWKPSSASKQDDSKSSFARLESTPAPYSKSEDSSITPPEAWGGERLSDKYT
NLLQPNIMPSRFGMSAQTSGSLISGLPDTSLSTSQTSISSTSLNYANMRIKDVSFNHENS
LGFPEHVNSSAMPMSPGSKGIMGQSSLDSPTSSLTLHRRFSTYAERIGTTSSFSDRTSLA
VGSPKTKKTGAEMRELLTSLVSKSDTSTATESGILPAMNGGTSQLQKVPQQDAQQGNSFT
FQIFQRTLEETLDSFQKSVHEDMRNLHIEILRQFHMQETDMSTVMSKILANQAELMEEVK
SLRKENQQLRQLL
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgaacatagtggatccgtcagtgactttactggccgcaagcggcggcgacaccgtgaag
ctcttcgacgtttccgtcaagtccggcgatccatgcgtctccagctacattccttctccc
ggttgccacgtcaactccgtcaagtggaaccacaccaatttggttgtggtgagtgccgga
gatgataagaagatatcgttgtggcataagaatgggcagagcttggggactattccggtg
gccgggacggacagtggtgacaacattgaggagtctatatcggcgcttagcttcagtaac
aaggtttcgagatatatatgttctggtgggagcggtcaggttgtgaggatatgggatttg
cagagaaagagatgtattaaatggttgaggggccactcgagtactattactggcgcagcg
tacaattgcaaagatgagcacttggcttccatcagccttagtggggatctcataatccac
aacctggcatctagtacaagaacaaccgaattcaaggaccctaatggacaggtactaaga
gtgcttgattattcccggattagccgacaccttttggtgactgcaggtgatgatggctct
gtgcatttgtgggacacaactggtcgtagcccaaagatttcttggttgaagcagcattct
gcacctactgctggtatcagtttctcaccgtcaaatgacaagatgtttgctagtgtcggg
ctcgataaaaagttgtatacttacgactcagggtctaggagacattcatcttgcatctcc
tatgaggcacctttttctgcattggcatttagagatgatggctgggtactagcagctgga
acaagtagtggtcgtgttgtattttatgatgtccgtggtaaaccagagccttttactgtt
cttcgtgcttataatagttcagaggctgttacaagtttatgctggcaaaggtcgaaacct
gttgttgtaaatgaaagcagctgttctgttgagactgcgcttttaggagatgctgttgaa
gattcaatccttatgcctgatccacttccttctgtgacttcatcaaacctttctctatct
atggcagtatctagttctcggaatccaggccgttctggtttatctgctgatacattttca
gttacagcaactggcagtggattagcgtcaaccacacttaatgtttctactgcagaggat
acaccacatcgtgggcatttgtggccaggtggaacattgtcaagattgcatgctcctcga
tctacttttaacttcaaggatgatatggaggtattttcccctcttgtggatgttcatcct
atcacacctacacttgacaagctgtgggatgatcatgacagatcaaagaaggatagtgta
gataagaagccttcatcactattatttccctcgtccagtaggaggttcccattggcagag
gatgtgtcaagtgatcatccaatatttgattggaagcctagctcagcttctaaacaggat
gacagcaaatcttcatttgctcgattagaatcaactcctgctccatattccaagagtgaa
gactcatccatcacccctccagaagcttggggcggcgaaagattatctgataagtatacc
aacctgcttcagccaaacattatgccatctcgctttgggatgtcagctcagacatcagga
tcacttatatctggattaccagatacatccttatcaacaagtcagacaagtattagctct
acaagcttaaactatgcgaatatgcgcattaaagatgtctctttcaatcacgagaattcc
ttgggatttccagaacacgttaactctagtgccatgcctatgtcccctggtagcaaaggg
atcatgggacagtctagccttgattcaccaacatcgtctttgaccctccatcggagattc
tctacttatgcagagaggataggcactacatcttccttcagtgaccgaacatcactcgca
gtgggttcaccaaaaacaaagaaaacaggagctgaaatgagagaattgttaactagcttg
gtgtcaaagtcagatacatcaactgccacagaatcagggattcttccagcaatgaacgga
ggaacctcacaactgcagaaggtccctcaacaagatgcacagcagggaaattcctttaca
tttcagatttttcaacgtactctagaagagactcttgattcctttcagaaatcagtacat
gaagatatgaggaaccttcatatagaaattttaagacaattccacatgcaagagacggat
atgtcaacggtaatgagtaaaattttggcaaaccaagctgagctaatggaagaagttaaa
tctctgcggaaagaaaaccagcaactccggcaattgctttga

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