Rosa chinensis (China rose): 112182849
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Entry
112182849 CDS
T06020
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112182849
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112182849
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112182849
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112182849
03041 Spliceosome [BR:
rcn03041
]
112182849
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112182849
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
112182849
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112182849
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112182849
Spliceosome [BR:
rcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112182849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
112182849
NCBI-ProteinID:
XP_024177169
LinkDB
All DBs
Position
1:complement(58689719..58693863)
Genome browser
AA seq
316 aa
AA seq
DB search
MATQGQGAMDPAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCVASREIFLQQPNLLEL
EAPIKICGDIHGQYSDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKIKFP
ENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKSFTDSFNCLPVAALIDDKILCMHGG
LSPDLTNLDQIRNLPRPTAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEF
LMKHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQI
LKPAEKKTKFMVSTKM
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcaggggcagggagcgatggaccctgccgtgctcgatgacataatccgacgg
ctcaccgaggtccgattggccaggccggggaagcaggtccagctctccgagtccgagatc
aaacagctctgtgttgcttccagggaaatcttcctccagcagcccaatttgctcgagctt
gaagccccaatcaaaatttgcggtgacattcatgggcaatatagcgacctattaaggctc
tttgaatatgggggctttcctccaagtgcaaattatctgtttttaggtgactatgtggat
cgtggcaagcagagtttagaaacaatatgcctcttgctcgcgtataaaatcaaatttcca
gagaacttttttcttcttagagggaatcacgaatgtgcttctattaatcgtatatatggt
ttttatgatgagtgcaagcgccggtttaatgtcagactttggaaatcctttaccgacagc
tttaactgccttcctgtggcagctcttatagatgacaaaatattatgtatgcatggtggt
ctttcccctgatttgacaaatttggatcagatcaggaatttacctcgtccaactgctatt
cctgatactggcttgctttgcgatttgctctggtcagatcctggcagagatgttaaagga
tggggaatgaatgatagaggagtctcctatacgtttggccctgataaggttgcagaattt
ctaatgaagcatgatttggaccttgtttgtcgtgctcatcaggttgtggaggatggttat
gaattctttgccgacagacaacttgttacaattttttcagcccccaactactgtggtgaa
tttgacaatgctggtgccatgatgagtgtggatgagaacctaatgtgctctttccagatt
cttaagccagcagagaaaaaaacaaagttcatggtgtcaacaaaaatgtga
DBGET
integrated database retrieval system
