Rosa chinensis (China rose): 112183292
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Entry
112183292 CDS
T06020
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112183292
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112183292
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
112183292
NCBI-ProteinID:
XP_024177396
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All DBs
Position
2:43773588..43776641
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AA seq
478 aa
AA seq
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MLEKINMAHEEEAINSNGFLQNPVAVLGSNPPPVKKKRNLPGNPDPEAEVIALSPKTLMA
TNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRVYVCPEKSCVHHHPSRA
LGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDS
FITHRAFCDALAEETARVNAVSNIHNNAMPSNINYHHYMGNNASSLLLGPPNMPQLQFSS
IFKPISSNDTPDTVSQNTRGLSLWMGQGSNSTHEEMTVNNQHHHHQLGSVSSSAGSIFGD
PNNISVSCSVPPPPSDHYQLNWVLGSNNKLSTSNNAHHQDQLTITSTSAASSLPSLYTHQ
TPSANMSATALLQKAAQIGATSTDTSSLLGSFGLKCNNNNITSSASQAVIQVQDGSKVCG
LYGTVENPGAHDHLLHMHQAKRRHIQSEESAGGGQTRDFLGVGVQTICHSSPINGYWV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttggagaagatcaatatggctcatgaagaagaagcaattaactcaaatgggtttctt
caaaacccagttgcggtacttggatccaatcctcctcctgtcaaaaagaagagaaacctc
ccaggaaacccagatcctgaggctgaagtaatagccttgtctccaaagactctgatggcc
accaacagattcttgtgtgaaatatgtggtaagggatttcagagagaccaaaacctacag
ctgcaccgccgtggacacaaccttccatggaagctcaagcaaagaacaagcaaagagccg
aggaagcgcgtctacgtgtgcccggaaaagagttgcgtccaccaccacccgtctagggcg
ctcggagatctgaccggaataaagaagcacttctgccgcaagcatggcgagaagaagtgg
aagtgtgagaagtgctccaagcggtacgcggtgcagtcggattggaaagctcactcaaag
acctgtggcactagggagtacaaatgtgactgcggaactctattttcacggcgtgatagc
ttcatcacacaccgggccttctgtgatgccttagctgaagaaacagctagagtaaatgca
gtatccaacatccacaacaatgcaatgcccagtaatatcaactatcatcactacatggga
aataatgcatcttcactactactaggacctccgaacatgccccaactacaattttcttct
atttttaaaccaatctccagcaatgatacccctgacaccgtgagccaaaatacccgcggt
ctatctctttggatgggacagggatccaacagcacccacgaagaaatgactgttaataat
cagcatcatcaccatcaacttgggtctgtgagttcatcagctggttcaatatttggtgat
cctaataacattagtgtttcgtgttcagtgcctcctccgccttctgatcattatcaactg
aattgggttcttggaagtaataacaagctttctacatcaaacaatgctcatcatcaagat
cagttaacaatcacaagcactagtgctgctagctcacttccttctttgtacacacatcaa
acgccttcagcaaatatgtcagccacagctttgttgcaaaaggcagcccaaattggtgca
acttcaactgacacgtcatcactgcttggaagttttggattgaagtgcaacaacaacaat
attactagtagtgctagtcaagcagtgattcaagttcaagatgggagcaaagtttgtgga
ctctatggcactgtggagaacccaggagctcatgatcatctactgcacatgcatcaagcg
aaacgccgccacatacagagcgaagagagcgccggaggagggcagactagggatttcctt
ggtgttggcgtgcagaccatttgccactcttcaccaatcaatggatattgggtttga
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integrated database retrieval system