Rosa chinensis (China rose): 112183541
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Entry
112183541 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112183541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112183541
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112183541
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6787
Motif
Other DBs
NCBI-GeneID:
112183541
NCBI-ProteinID:
XP_040368445
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Position
1:complement(66472014..66474997)
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AA seq
624 aa
AA seq
DB search
MFKPTDEEAPEVSMTAGHNTHSEYDRRQSELKKNKSRISSWWTSLWVRGTWWDSIFVASC
VIAVSLDPLFFYIPIIDREKKCLQADRQLRTVTLILRSVMDITFIVHIIYQIREAMIAAA
LDKMAKPKSSDFFKGPFFKRVGAIVDNLSWRSLITDILAVLPIPQVLLLVVFFKMRGSGY
LNHRKILNFFLLLQYLARIYRIHLSSKKLTKSHGIWIKGLFNLFLYIFASHVLGAFWYFF
SIQRETSCWHRSCGPNCISTFYCDEYKHSDDMVTLITSLNASCPINTTGPFDFGIFLDSL
KSNNPASINFPQKLCYSFWWGLRNLSNFGTNLVTSNYVWENLFAILISIIGLLLFLYLIG
NVQTFMSMGTAKSEEIRRKIKSKKQVMKEWMEKNCLPAKLRKEIMANIREKLEQDNHADM
GDPYSILPSSTKKSLKRALCMSTLRKVPRLEGMNPKVLKMICDYLKPVTYPEHHYVAKVD
EPVDQMVLVKEGTMWIYSSNTSTPSKIHRTVENGGIYGDEQLLSWASKDMQHVSFENFPI
SKENVKCHTKVEGFAIAAKDLKDVATKCKMFWNYDDPREERVASSTIGRTFRRNRNNPNR
PATVGVGAATSSRTGIEYLQIERT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcctactgatgaagaagccccagaagtaagtatgacagctggtcacaatact
cattctgaatacgaccggagacaatcagaactgaaaaaaaacaaaagcagaattagttcg
tggtggactagtttatgggttcgaggtacatggtgggattcgatatttgtagcctcgtgt
gttatcgcagtctcactggatccactgttcttttacattcctatcatcgatagggaaaaa
aagtgccttcaagcagacagacaattgaggactgtaactctcattttgcgatcagtgatg
gatatcacttttatagtgcatattatctatcagattcgtgaagctatgatcgctgcagcc
ctcgataagatggctaaaccgaagtcttccgatttctttaaaggacccttctttaaacgt
gtcggtgcaatagttgacaatttgtcatggcgctctctcataactgacattctagctgtt
cttcctatcccacaggtgctactacttgttgtcttctttaaaatgagaggctctggatat
ttgaaccacagaaagattttgaatttctttcttctccttcaatatttggcaagaatttat
cgtattcacctatcttccaaaaaacttacaaagagtcatggaatatggattaaaggacta
ttcaatttatttctctatatctttgcaagtcacgtacttggagccttttggtatttcttt
tcgattcaacgagagacatcatgttggcatcgaagttgcggtcccaactgtataagtacc
ttttattgtgatgagtacaaacattcagacgatatggtgacacttataacatctctgaat
gcatcgtgccctatcaatactactggaccatttgattttggaatatttcttgattctcta
aagtccaataacccggcatcaatcaactttccacaaaagttgtgttactctttttggtgg
ggtctacgaaatttgagtaattttggcacgaatcttgtaacaagtaactatgtatgggag
aatttattcgcaattcttatttctatcattggcttgttactgtttttgtacctcatcgga
aatgtgcagacatttatgtctatgggaactgcaaagtcagaggagataagaaggaagatc
aaatcaaaaaagcaagttatgaaagagtggatggagaaaaattgcctccctgctaagttg
aggaaagaaatcatggcaaatataagagaaaaattagaacaagacaaccatgctgacatg
ggggatccgtactccattcttccctcgtcaaccaaaaaatctctaaagcgtgctctctgc
atgagtacactgagaaaagtaccaaggcttgaaggtatgaatccaaaagttttgaaaatg
atatgtgactatctgaagcctgtgacataccctgagcatcactatgttgccaaggtggat
gaaccagttgatcagatggtgcttgtcaaagaaggaactatgtggatctactcgtcgaat
actagtactccatccaagatccacaggacggttgagaacggtggcatttatggagatgaa
caacttctgagttgggcgtcgaaggacatgcaacacgtctcgtttgaaaacttcccgatc
tcaaaagaaaatgtgaaatgtcatacaaaagtggaagggtttgctatcgcggccaaggac
ttgaaagatgtggccaccaagtgcaaaatgttttggaattacgatgatcctcgagaggag
agggtggcgagctctaccataggaaggacattccgtcgaaaccgcaataacccaaatagg
ccggctaccgtaggagtaggagctgcgacctcgtcaagaacaggaattgagtatctgcag
atcgagagaacctaa
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