Rosa chinensis (China rose): 112183579
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Entry
112183579 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112183579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112183579
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112183579
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Motif
Pfam:
cNMP_binding
DUF5323
Spore_III_AF
S1FA
Motif
Other DBs
NCBI-GeneID:
112183579
NCBI-ProteinID:
XP_024177722
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Position
1:complement(66515050..66518920)
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AA seq
640 aa
AA seq
DB search
MSKHKVPNYDESIIDLSVTQGIGYDFNCPEALSQHPIRKREPEETQASNKGKRPTVAEVL
SVLNPSWNTILLTSCVIAVLFDPLFFYIPYINEKEKCMGIDKQVRTAALVFRSVTDITFL
VHIIYQLREAIKFAASKVPRDTNSKNWEWESVSRAQMIKFAKEFSRKLSWRSFLTDVFAI
FPMPQLLIVGFFFEMGGSNYLERRKILSGFVLIQYVPRIYRIYLSYTAVTHSALWVKGAF
NFFLYILASHVLGAFWYFFSIFRETSCWYRSCIEANPRSGCTFYCHDKTPIVTEGFNKTT
LGDLCLLKVPHNMLEPPFDFGIFFDALKNDIQGPINFPTKIGFCFWWGLRNLSSFGTSLE
TSTYLWENTFAILISIIGLLLFLYLIGNVQLYMAKAITRAEEVREKIQTKKNDIEKWMEN
NDLQDDMKEEIMKNIKKKLEEDINADLENLFSVLPWYTKKALKRVLCMSALRKVPMLSQM
DEKVLKMMCDYLKPVNYPENTLVFQMGEPFDRMVFITEGLMWTYTTATESSHYGKATKPA
TSPSMDTNFLKKGDSYGHALLQFASSSLAALPTSNANVRCHTRVEAFVLMAKDLKNIVTK
CEHLWPFDYNASKDEAADKVAPLGQLPKKCVSTSTTGNRG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacataaggtacccaactacgatgagagcatcatcgatttgagcgttacacaa
ggaataggttatgatttcaactgtcctgaggctctatcgcaacatccaatacggaaacgt
gaacctgaagaaactcaagcaagcaacaaagggaaaaggccaacagttgcggaggttctt
tcagttttgaacccatcgtggaatacgatactattaacttcatgtgtgattgcagtttta
tttgatcctttgttcttttacattccatacatcaatgagaaagaaaagtgcatgggaatc
gataaacaagtgcggactgcagctctggttttccgatcagtcacggacatcactttccta
gtgcatatcatataccaacttcgtgaagctatcaaatttgcagcttcaaaggttccaagg
gatacaaattcaaaaaattgggaatgggaatcggtatcccgagctcagatgattaagttt
gcgaaggaattttctcgcaaattgtcatggcgctctttcctaactgatgttttcgctatt
ttccccatgccacaactgctaatagtagggttctttttcgaaatgggaggcagtaactat
ttggagagaagaaagattctgagtggttttgttctaatccaatatgtgccaagaatttat
cgaatttatctatcgtataccgcggttacacattccgcattatgggttaaaggtgcattc
aatttttttctctacatccttgccagtcatgtactgggagctttttggtactttttttct
atttttcgagagacatcatgttggtaccgaagttgcattgaggcaaatccaagatcagga
tgcactttttattgccatgacaaaactccaattgtaaccgaaggattcaataaaactact
ctaggagatctttgccttttaaaagttccacataatatgttggaaccaccatttgatttt
ggaatattttttgatgccctcaaaaatgatatccaggggccaataaattttccaacaaag
attggtttctgcttttggtggggcttgcgaaatttaagttcttttggcacaagtttggaa
acaagtacctatctgtgggaaaacacctttgcaattcttatttctatcatcggcttgcta
ttgtttctatatctcattggaaatgttcagttatatatggcgaaggcaattacaagagcg
gaagaggtaagagagaaaattcagaccaaaaagaacgatatagaaaagtggatggaaaat
aatgacctccaagatgacatgaaggaagagatcatgaaaaacatcaagaaaaaattggaa
gaggacataaatgccgatctggagaatctattctctgttcttccctggtataccaagaaa
gctctaaagcgcgttctttgcatgagtgcgctaagaaaagtaccaatgcttagccagatg
gatgaaaaagttttgaaaatgatgtgcgactatctgaagccggtgaattacccagagaat
accttggtttttcagatgggagaaccatttgatcgaatggtcttcattacagaagggctt
atgtggacttacacgactgctactgagagtagtcattatggaaaagcaacaaaaccggct
acttctccatccatggataccaacttcctcaagaagggtgattcttatggacacgcgctt
ctgcagtttgcatcatcatctcttgcggcactccctacctcgaacgcaaatgtccggtgt
cacacaagggttgaagcgtttgttctcatggccaaggacttgaaaaacatagtaactaaa
tgcgaacatttgtggcctttcgactacaatgcttctaaagatgaggcggcggataaggtg
gcaccactggggcagttgccaaagaagtgtgtatcaacatcgaccactggcaaccgtggg
tga
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