Rosa chinensis (China rose): 112183691
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Entry
112183691 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112183691
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112183691
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112183691
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112183691
NCBI-ProteinID:
XP_024177815
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Position
1:complement(66665847..66685602)
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AA seq
660 aa
AA seq
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MANNHSDITVVDVAENWDEKTKRGVLDYWQVETATGKSAAKDEGNRSKWSRTFKKIVDPE
GNFLPVWNKIFIITCVVAVSLDPLFFYIPIVNEDMKCLILDKNLKAIALASRSFTDRFYM
MDILLNILAVTMAKSPSARSGDPSSGKKSALDRVLAIANASMVVAKRIFRSYILVDILAV
LPVPQVVIFSFFSKMRSSRSSETRKFLNSLVVFQYVPRVLRIFLLCKERHLIPRKAGIWI
KSVFNFFLYILASHVLGALWYYFSILRETACWQYAYHSQNQYEHSYDCDEHSSYDCDEHY
TLRNVTLLNGLCPIDPPNPTLFDFGVFTDAFLSGMLGSTDFPQKILICFWWGLRNLSSLG
QNLQPSTNAWENLFAVSISIIGLLLFLYLIGNLQTYLQFGTTRAEEIRWRTKTKDLEVDL
WLSRKGIPKVLKELIMQTVERRIEENKDVQVENILSLLPVRHSNFIKRYLRLATLKKVPM
LQRMDERLLREICKYLKPVTYAEEHPIMEEGRPLDKMFFIRQGMVRTYRIHKGDKGIKIG
NSKVLEQGDLYGEELLDWVSNFTPPCVLPLPNSTRSVKSVNKVDVFVLKAEHLETVVTKC
WWHFTKDKFLYQYYNEDQLDQLKSLAASAIQRQITRIQKKYAKGPQMVTGHGSKKRKLGA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaccactctgacataacagtagtagatgtggcggagaactgggacgagaaa
actaagagaggggttttagattattggcaagtagagactgcaacaggtaaatccgccgca
aaggatgaaggaaatagaagcaaatggtcaagaacattcaagaaaattgttgatccagaa
gggaatttccttccagtatggaataagatatttataataacatgcgtggttgctgtgtcg
ctcgaccctttgttcttctacattccaatagtaaatgaagacatgaagtgcctcattttg
gacaaaaacttgaaggcaatagctcttgcatcaagatcgtttacagatcgcttctacatg
atggacattcttttaaatattttagctgttactatggctaaatcaccatcagctagatct
ggggatccctcaagtggaaagaaatcagcacttgatcgtgttttggcaatagcaaacgcg
tctatggtagtagctaaacgaattttccgatcatacattttagtggacattttagctgtt
cttcctgttccacaggttgtaattttcagcttcttttccaaaatgaggagctcaagatct
tcggaaacaaggaagttcctaaactcccttgttgtgtttcaatatgtgccacgggttctt
cgcatttttctgttgtgtaaggaacgccatttgatcccaagaaaggcaggcatatggatt
aaaagtgttttcaatttctttctttacattctagctagtcatgtactcggagctctttgg
tattatttttctattctaagagagacagcttgttggcaatatgcttaccatagtcaaaat
caatatgaacacagctacgactgtgatgaacacagcagttacgactgtgatgaacactat
acattgagaaatgtaacattactaaatggactatgtcctatagatccaccgaacccaacg
ctcttcgactttggtgtatttactgatgcctttttatctggcatgcttgggtcaacagat
tttccacaaaaaattttaatttgtttctggtggggcttgcgaaatctcagttctcttggt
cagaacctgcagcccagtaccaacgcttgggaaaacctctttgcggtttccatttctatt
attggcttgctactatttttatatctcattggaaatttgcagacatatttgcagtttgga
actacacgagcagaagagattaggtggagaacgaaaacgaaagatctggaggtagatttg
tggctatcaagaaagggcatccctaaagtactgaaggaactgatcatgcaaactgtggaa
cgaagaatcgaagaaaacaaagatgttcaagtggagaacatcctctctctacttcccgtg
agacacagcaattttatcaaacgctatctgcgactggctacacttaagaaagttccgatg
cttcaaagaatggatgaaagattgttaagagagatatgtaagtatcttaagccggtgact
tacgcagaggagcatcctattatggaagaggggcgtccacttgataagatgtttttcatc
aggcaaggcatggttcggacctacagaatacataaaggagataaaggtataaaaattggt
aattctaaggttcttgagcaaggcgatttatatggggaagaacttctcgattgggtctca
aattttactcctccttgtgtcttgcccttgcccaactcgacgagaagtgtcaagtcagta
aacaaagtcgacgtctttgttctcaaggctgaacacttggagaccgtagttacgaaatgc
tggtggcatttcaccaaggacaagtttctgtaccaatattataacgaagatcagttggat
cagttgaagagtttagcagcttctgcaatacaaagacaaatcactcgcattcaaaagaag
tatgcaaagggtccccaaatggttactggtcacggtagtaaaaagagaaaattaggggcg
tag
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