Rosa chinensis (China rose): 112183694
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Entry
112183694 CDS
T06020
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112183694
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112183694
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112183694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
Rhodanese
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
Rad50_zn_hook
OppC_N
ECSCR
HTH_63
Motif
Other DBs
NCBI-GeneID:
112183694
NCBI-ProteinID:
XP_024177814
LinkDB
All DBs
Position
2:complement(11499301..11505997)
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AA seq
485 aa
AA seq
DB search
MELRKRKMRQALLGFSVIVFVELSSATVVYKPLSMAFADLPAKFAVGVDRAGACGTLVNA
DPLNACSPLRNGRQANETDRARFALIVRGECSFKDKVRNAQNAGFGAAIVYDDRDGEDLV
YMMINGENTTIHAVFVSKATGELLKDHAYDEEGECCIFPFQTETAWTVLAISFISFIVIL
GILLIAIFAPRHWLYSQGRNQLPKSVDRKVVEALPCFTFSSARLGECHSEETCAICLENY
KDGEILKVLPCQHEFHSSCVDSWLTKWGTCCPVCKHDMRTKSVNPEFLSQILKAVAKFDM
RVYWLVVPCGFVALLLVLFCSSGDEVVTIDVQEAKDLIKSGYGYMDVRTVEEFKRGYVDA
EKIYNIPYMFNTPEGRVKNPDFLKEVASACSKEDHIVVGCQSGVRSLYAVADLQNVGYKH
LSNMGGGYLAWTEKHFPVVKPEDVDQKKPEIVELKKPEDDEEKKPELVEPKKPEDVEQKK
PEAEL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagaaagagaaagatgaggcaagctttacttggattctctgtgattgtgttt
gttgaactaagctctgcaactgtggtttacaaaccattgtctatggccttcgctgacctt
cctgccaagtttgctgttggtgttgatagagctggtgcttgtgggactttggtaaatgca
gaccctttgaatgcatgttcgcctctacggaatgggcgccaagcaaatgaaactgataga
gcaaggtttgctttgatagttagaggggagtgttctttcaaggataaagtacggaatgct
caaaatgctggttttggtgccgcaattgtttatgatgatagagatggagaagatctagtt
tacatgatgataaacggtgagaatactacaattcatgccgtgtttgtttcaaaagcaaca
ggtgaactactgaaggatcatgcttatgatgaggaaggggaatgctgtatctttccattt
caaactgaaacagcctggactgtgctagctatatcttttatctcattcattgtcatattg
ggtatattattaatagccatatttgctccaagacactggctgtactcacaaggaagaaac
caacttcctaaaagtgtggataggaaggtggttgaagctctaccttgcttcacattcagt
tccgctcgtttgggtgaatgccacagtgaagaaacttgcgccatctgccttgagaattac
aaagatggggaaattcttaaagttcttccctgtcaacacgaatttcattcaagctgtgtg
gactcatggctgacaaaatgggggacatgctgccccgtgtgcaagcatgatatgagaaca
aaatctgtgaatcctgagtttctcagtcaaattttaaaagctgttgcaaagtttgatatg
agagtttattggttggtagtcccttgtgggtttgttgctttattgcttgtgttattttgt
agctccggggatgaggttgtgactattgatgttcaagaagctaaggatctgatcaagtct
ggctatggctatatggatgttaggactgtggaggagttcaagagagggtatgtggatgca
gagaagatttacaatattccttacatgttcaatacccctgaaggtagagtgaaaaatcct
gatttcttgaaagaggttgcatctgcttgcagcaaagaagatcatattgttgtgggttgt
caaagtggggttagatccctatatgcagttgctgatcttcaaaatgttggttacaagcat
ctgagcaacatgggaggaggttatttggcttggacagagaaacattttcctgttgttaag
ccagaagatgtagatcagaaaaagccagaaattgttgagctaaaaaagccagaagatgat
gaggagaaaaagccagaacttgtggagccaaaaaagccagaagatgttgagcagaaaaag
ccagaagctgagctctag
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