Rosa chinensis (China rose): 112184732
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Entry
112184732 CDS
T06020
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112184732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112184732
Spliceosome [BR:
rcn03041
]
Complex A
Other components
Complex A specific factors
112184732
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
RRM_5
PHD_4
zf-CCHC_4
eIF3g
KH_PNO1_2nd
RRM_7
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
112184732
NCBI-ProteinID:
XP_024178739
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All DBs
Position
2:55612258..55617400
Genome browser
AA seq
760 aa
AA seq
DB search
MGTLQPNHNPPPIDDDEPDHDPPYFPAISEIPMPPPSPLQCAHTLASGAGIPSRNPETST
ENGDSTKPVANDFANTHFGADLDFSGGEEEASSSRRRRSRWDPQPETESQSGVCARRRKS
RWADEEPKPVIQLPGFVGGIEFDPEIQALNSRHLEISRMLSSGLPLDDRPEGDRSPSPEP
VYDNFGIRINTREFRARERLNKERQEIITQIIKRNPTFKPPADYRPPKLHKKLYIPVKEY
PGYSFMGLIIGPRGNTQKRMEKETGAKIVIRGRGSVKEGRSQQKRDSKPDLSENEDLHVL
VEADTQEAVDAATGMVEKLLQPVDEVLNEHKWQQLKELALLNGTIREEEFCRLCGEPGHH
QNACLSRTSTFKRDVLCKICGDGGHPTIDCPVKRTNGKKMDDEYQNFLAELGGTMPESAT
KQTATLALGAGSSVSSPPWVNNAGNASSTAHPGLGSTGLKPSRDYDDTNLYIGHLPPTLD
DDGLIRLFSRFGNIVMCKVIKDRATGLSKGYGFVKYADVRMANSAIASMNGFSLEGRTIA
VRVAGKPQQPVVSPGPPASAMSPYPVSSQPVGAYPSQQFTPGGPLWTVPSTSYAGTPVPW
GTPVPPPYSPYASPAPPPPGSTMYPPPTPGQPVAAYSAQYPPPPGASRQPVTLSEAQQSY
TPPGVQSERSTQSAPTNIYTMPTNGQHAYPTSACGYPSYYNAVPPPPAPGPVPGSTAYQS
QSIGNVPWATSTPVLPPNSSADKATHGAGAEYEKFMAGMK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctccaaccaaaccataaccctcctcccattgacgatgatgaaccggatcac
gaccccccttattttcccgccatttccgaaatcccaatgcctccgccttcgcctcttcag
tgcgctcataccctagcttccggtgccggaattccctcccggaatcccgagacttctact
gagaacggcgactcgaccaaaccagttgctaatgacttcgccaacacgcacttcggcgcc
gacctggacttctccggcggagaggaggaggcctccagcagccgccgccgccggagccgg
tgggaccctcagccggagacggaaagccagagcggcgtctgcgcgaggaggaggaagtcg
cggtgggccgatgaggagccgaagccggtgattcagctgccggggttcgtgggaggtatt
gaattcgatcctgaaattcaagctttgaatagtaggcatcttgagattagtaggatgttg
tcttccggtttgcctttagatgatcgcccggaaggggataggtctccatcgccggagccg
gtgtatgataactttggaattaggattaatacaagagagtttcgtgcgcgtgagaggttg
aacaaagagaggcaggaaattattactcagattattaagaggaaccctacatttaagcct
ccggcagattacaggccgcccaagcttcacaagaagctgtacatacccgtgaaagagtac
cctggttatagttttatgggacttatcattggcccgagggggaatacccagaagaggatg
gagaaggagactggtgctaagattgtcattaggggtagagggtcggtgaaagagggtagg
tcgcaacagaagagggattcgaagcctgacctgtctgaaaatgaggacttgcatgttttg
gtcgaggctgacacgcaggaggctgttgatgccgcaactgggatggtagagaagctgttg
cagcctgtggatgaggtgttgaatgagcataagtggcagcagcttaaggaacttgcgttg
ttgaatgggactattagggaagaggagttttgtaggttatgtggtgagccggggcaccat
cagaatgcctgtctgtcacgaacttcaacgtttaagagagatgttctttgtaagatatgt
ggtgatggtgggcatccaactattgattgtccagtgaagcgtacgaatgggaagaaaatg
gatgatgagtaccagaactttttggctgagttaggtgggacaatgcccgaatcagcaact
aagcagactgctactttggctcttggcgcaggcagctcggtaagcagtcctccttgggtt
aacaatgctgggaatgctagcagtacagcacatccaggattgggctcaactggattgaag
cctagcagggactatgatgacacaaatttgtacattgggcacttgccacctactcttgat
gatgatggtttgataaggttgttttcacgtttcggtaatattgtgatgtgcaaagttatt
aaggaccgggctactggattgagtaaaggttatggatttgtgaagtacgctgatgttcgg
atggctaatagtgcaattgcaagcatgaatggtttttccctcgagggtcgaaccattgct
gtcagagttgctggcaagcctcaacagcctgttgtgtctcctggaccaccagcttcggca
atgtcaccatacccggtctcaagccagcctgttggtgcttatccatcccagcaatttacc
ccaggtggccctctttggactgtaccatctactagctatgcaggaactccagttccttgg
ggaacccctgttcctcctccatattctccttatgcttctccagctccccctcctccaggt
tcaaccatgtaccctcctcccacgccgggtcaacctgtggctgcttacagtgcacaatac
cctcctcctcctggtgcatcacgtcagccagtgacgttaagtgaagcacaacagagttat
actcctccaggggtacaatctgaaagatctacccaatctgcaccaactaatatatacaca
atgccaacaaatggccaacatgcttatcctacatctgcatgtggctacccatcttactac
aatgcagttccaccacctcctgcccccggacctgtacctggttcaactgcataccaatcc
cagagcattggtaatgtgccatgggccacaagtactcctgttcttcctcctaattcttct
gcagataaagcaactcacggtgcaggtgcagagtatgagaagttcatggcgggtatgaaa
tga
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