Rosa chinensis (China rose): 112184868
Help
Entry
112184868 CDS
T06020
Name
(RefSeq) light-harvesting complex I LH38 proteins
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00196
Photosynthesis - antenna proteins
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
112184868
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
rcn00194
]
112184868
Photosynthesis proteins [BR:
rcn00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
112184868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
112184868
NCBI-ProteinID:
XP_040369493
LinkDB
All DBs
Position
2:complement(69272943..69278274)
Genome browser
AA seq
549 aa
AA seq
DB search
MAASTMSLSSPSLAGQAVQLSPAASNILGEGRITMRKSAAKSKNVSSGSPWYGPDRVKYL
GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG
GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
IENLADHLADPVNNNAWSYATNFVPGKSLIARNHERSQHFPQMASSTMALSSPSLAGQAV
KLGSSTSNLLGEGRVTMRKTAAKSKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD
YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQ
IFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDP
LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWS
YATNFVPGK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcaacaatgtctctgtcctctccttctctggctggccaagctgtgcagctc
agtccagctgcatctaacatcctcggtgagggcagaatcaccatgcgcaaatccgcagcc
aagtccaagaatgtgtcgtctggcagcccttggtacggcccagaccgtgtcaagtacttg
gggccattctccggtgaggctccatcttacctcactggagagtttcccggtgactacggt
tgggacacagctgggctctcagctgatcccgagacctttgccaagaaccgtgagctcgag
gtcatccattcaagatgggccatgctcggtgctctaggatgtgtcttccctgaactccta
gctcgtaacggagtcaagttcggagaagctgtttggttcaaggctggagcccagatattc
agtgaggggggactagactacttgggaaacccaagcttagtccacgctcaaagcattttg
gcaatctgggcaacacaagttatcttgatgggtgcagtcgaaggctacagaattgcggga
gggcctctcggtgaggtagtagacccattgtaccccggtgggagctttgaccccttaggg
cttgcagacgatcctgaggcttttgctgagcttaaggtgaaggagctcaaaaacggaaga
ctggccatgttttccatgttcggattcttcgtacaagctattgttaccggaaagggaccg
attgagaacctagctgaccacttggctgaccctgttaacaacaatgcttggtcatatgcc
acaaactttgttcccggaaagtcattaattgcaagaaatcatgagaggtctcaacacttt
ccacaaatggcttcctcaacaatggctctctcctccccttctctagctggccaagctgtg
aagctcggttcctctacatctaacctcctcggtgagggccgagttaccatgcgcaaaacc
gcagccaagtccaaaaatgtttcatccggcagcccatggtacggccctgaccgtgtcaag
tacttgggcccattctccggcgaagccccgtcttacctcactggagagtttcccggtgac
tacggttgggacacagctgggctctcagctgatcccgagacctttgccaagaaccgtgag
ctcgaggtcatccattccagatgggccatgctaggcgccctaggctgtgttttccccgaa
ctcttggctcgtaatggggtcaaattcggcgaagctgtttggttcaaggctggagctcaa
atcttcagtgagggtggattagactacttgggaaacccgagcttggtccatgcccaaagc
attctggcaatttgggcaacacaggttattttgatgggtgcggtagaaggctacagaatt
gccggtgggccgctcggtgaggttgtagaccctttgtaccccggcgggagctttgaccca
ttagggcttgcagacgatcccgaggcttttgctgagctcaaggtgaaggagctcaagaat
ggaagactggccatgttctcgatgttcgggttttttgtgcaagctattgttacaggaaag
ggaccgattgagaacctagctgaccacttggctgaccctgttaacaacaatgcttggtca
tatgccacaaactttgtacccgggaagtga
DBGET
integrated database retrieval system
