Rosa chinensis (China rose): 112184992
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Entry
112184992 CDS
T06020
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112184992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112184992
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112184992
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
WSD
Motif
Other DBs
NCBI-GeneID:
112184992
NCBI-ProteinID:
XP_024178978
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All DBs
Position
2:complement(74864627..74866898)
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AA seq
315 aa
AA seq
DB search
MERDPRRGSNITASIANLPESLLGDQPSPPPGGGGRAFPTMPGSEFARSIYADPARREVE
QLIEELNDRRTREQALQGLSKLKEVPDVALLLWHTSGLMFMLLREITGVYHLMSTPNLTQ
EVSNRVCNTITLFQCIASHLETRKPFIRASMPLYLYPFIGTENKDKPHEYLRLSSLGALG
ALVKGHPPSRDEVDPEIIHFLLESQVFCHCIRCMEVGGVLSRTRFENIYVPLNVPAHVLQ
VATFVVERILTTDEGLNYCCNFGDRFYVVTHVLGKMTDKLLEEPSARLLKLIIKCFLILS
RGPRYAMTNEIILNS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggagagagatccgaggagaggcagcaatatcactgcctcaattgctaaccttccagaa
tcattgttgggcgatcaaccatcaccaccaccaggaggaggaggcagggcgtttccaacc
atgcctgggtcggagtttgcccgatccatttacgccgacccggccagaagggaggtagag
cagttgattgaggagcttaacgatcgtcgtacccgagaacaggctctacaaggtctctct
aagctgaaggaggttcctgacgtggctctattactgtggcataccagtggtctcatgttt
atgctcctaagggaaataactggtgtataccacctgatgtcaaccccaaatcttactcag
gaagtatcaaaccgagtttgcaataccataactctgtttcagtgtatagcttctcatcta
gagacaagaaagccatttatcagagctagcatgccattgtatctctaccctttcattggc
actgagaacaaggacaagcctcatgaatatctcagactatccagcttaggtgctcttggg
gccctagtgaagggtcacccaccaagtagagacgaagttgatccagaaattatacatttc
ctcctagaaagccaggtattttgccactgcatccgctgcatggaagttggcggtgtattg
tcaagaactaggtttgagaatatttatgttcctttgaatgtgcccgcacatgttctgcag
gtggctacatttgtagttgaaagaattctgacaactgatgagggactcaactactgctgc
aatttcggggatcggttttatgtagtaactcatgttcttggaaagatgactgataagctt
cttgaagaaccttctgcccgcctgcttaaacttatcataaagtgctttcttatactgtcg
agaggtccaaggtatgcaatgactaatgagattattctcaatagttaa
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