Rosa chinensis (China rose): 112185001
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Entry
112185001 CDS
T06020
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112185001
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112185001
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
112185001
NCBI-ProteinID:
XP_024178986
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Position
2:75137338..75138419
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AA seq
345 aa
AA seq
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MAIFMFLLLAATAKAQPCVVFEVTSAKYGGKTNYDITDSLAQAWTDACVSVWSSKLVVPS
GTYWLRGATFIGPCKAPIKVQIQGKLKDPEDGHQLVNSDFWVAFRYIDRLYLSGGGTFDG
QGALGWNTYRAINVRFDYISNSIIQDITSLNSIRCNYRSESSNTDGIHIAYSWRINVTDA
NIETRDYCISIGNGTSQLTVTNVNCGPGHGISIGSLGKYLDEKPVYGLIIKNCTLTNTTN
GVRIKTWPSSPSARFASHIYFEDIIMNNVKNPIIIDQNYCPRHRCKQQAQLNTKISNVSF
KNIRGSSASQVAINIACSGSLPCENVELIGIDLEYSGDGDRPITS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattcatgttcttattgttagcagctacagctaaagcccaaccctgtgtagtc
tttgaagtgacgagtgcaaaatatggtggaaaaactaactatgatattacagactcctta
gcacaagcttggacagatgcttgtgtttctgtatggtcgagtaaactcgttgttccaagc
ggcacatattggttaagaggagcaacttttataggtccttgcaaggctcctatcaaggtg
caaatccaaggaaagttgaaagatcccgaagatggccaccaactcgtgaactcggatttt
tgggttgcttttcggtacattgacaggctctacttatcaggtggtggaacttttgatggc
caaggagcccttggttggaatacttatcgtgctattaacgtgaggttcgactacatctcc
aactccataattcaggacataacttcccttaacagcataaggtgtaactatcgtagcgag
agttctaatacagatggaatccacattgcatattcgtggaggatcaacgtaacggatgca
aacatcgaaactagagattattgtatttctatcggtaatggcacttcgcaactcacagta
accaatgttaattgtggaccgggacatggaataagcataggaagtcttggaaagtatctt
gatgaaaaaccggtatatggcctcatcattaagaactgcaccctcacgaacacaacaaac
ggtgtgagaatcaagacatggcctagttctcccagtgctcgttttgcctcacacatatac
tttgaggatattatcatgaataatgtgaagaaccccatcattatagaccaaaactactgc
cccaggcatcgttgcaaacaacaggctcagttgaacactaagattagtaatgtcagcttc
aagaacattagaggctcatctgcatcacaagttgccatcaatattgcatgtagtgggagc
ttaccatgtgagaatgtagaattgataggcattgatctagaatacagtggagatggcgat
cgacctattacatcttga
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