Rosa chinensis (China rose): 112185007
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Entry
112185007 CDS
T06020
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112185007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112185007
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112185007
Membrane trafficking [BR:
rcn04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112185007
Atg1 complex
112185007
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112185007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
112185007
NCBI-ProteinID:
XP_024178995
LinkDB
All DBs
Position
1:67697262..67700674
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AA seq
611 aa
AA seq
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MDFQNSYQPESGKLEQIVSQFLLKSLHIILDSRVPSLHPHDRSGELSLNSRVRKSDKWFN
LVLGDRPAALENLNFWHRNVMDPMIIDIILVHAGSNSSSVDNLFGNSGAGPSVETIIERW
VVQYETPRVVANQTGDSLAYKKTYKKSIVLLRALYSYMRLLPAYRIFRQLSTSRQTYDFD
IIYKVSSLRDPFSRAEEEMMQEFSFAPVEANPGRLSLSVTYRKMLSDFNLEPSTPMPPKI
ITDYVGSPATDPLRSFPSSVRGDRPTSFPLGPSSTGPFQRPHSWTSGFHRPPYVGQYKPV
VGSPPVYRASPMSHDVGSPPIDTYTNRVQNYRVPSHSKTPSYDEYQLSPPFSASPSPSPP
TYLSSGSFGPMQTRIRSETAPVSIPNPMGGKGSRYLSPNFSDPSRNSLPPLSLRSTRNEP
SSQESPSGIRAFRKLDGSRAGDMHPGFQKVKDSRDDSGRFSGLLSSSGSPRIGFSRSSSR
LSFQDDMDDCEFSCPFDVDDVDTTDFHASQNDGKKASEFTSQSLPIGRKSPGAAVGVLVH
MLRTAPPLRQDSSCYSSDSMKPEHEEGVTTASGFFMPRKTSDALEELRSYREMKDLLISK
SGMRVLTKEEA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaacagttatcagcctgaatcagggaaattggaacagattgtttcccaa
tttcttctcaaaagcttgcatattattttggattctagggtaccttctcttcacccgcat
gatcgcagtggagagctttcattgaattctcgggtgaggaagagtgacaaatggttcaac
ttagtactaggggaccgtcctgcagctcttgagaatttgaacttttggcacagaaatgtg
atggatccgatgataatcgacatcatacttgttcatgcggggtctaattcttcatcagtt
gacaatctgtttgggaattcgggggctggtccatctgttgaaacaatcattgagaggtgg
gttgttcagtatgaaactcctagggttgtggctaatcaaactggtgacagtttagcatac
aagaagacatataagaagtcaattgtacttttacgtgctctttattcatatatgaggctt
ctcccagcttataggatctttagacagctaagtacatctcgtcagacttatgattttgat
atcatttacaaggtgtcttcactaagagatcccttctcaagggcggaggaggaaatgatg
caggagttcagttttgctcctgtagaggccaatcctggccgcctttctttgtctgtgact
tatcgtaaaatgctgtctgatttcaatcttgagccttcaacacctatgccaccaaagata
attacagattatgttggtagtcctgctactgaccccttgaggtctttcccctcatcagtg
aggggtgatcgcccaacttcctttccattgggaccttcatctaccggaccatttcagcgt
ccacacagctggacaagtggcttccatagaccaccttatgttgggcagtataaacctgta
gttggatctccacctgtatatcgtgcatcccctatgtcccatgatgttggatctcctcct
attgatacatatactaacagagttcaaaactatagagttccaagtcattcaaagactcct
agttatgatgagtatcagctttcacctccattttcagcatctccatccccatcaccacca
acatacttgtctagtggcagttttggtcctatgcaaacacgaattcgttcagaaactgcc
cccgtaagcatccctaatccaatggggggtaagggctccagatacctttctcccaatttt
tctgatccaagtagaaattcccttcctcctttatctctgagaagcacaagaaatgaacct
tcctcacaagagtctccatctggaataagggcatttagaaaactagacggttcaagggct
ggagatatgcaccctggttttcaaaaggtgaaagacagcagagatgattcgggccggttc
tcaggattgttgtcctccagtggctcaccacgcattggtttttctagaagctccagtaga
ttatcttttcaagatgatatggatgattgtgagttctcatgccctttcgatgtggatgat
gttgacacaaccgactttcacgccagtcaaaacgatggcaaaaaagcttcagagtttact
tcccagtcattgccaattggtagaaagtcaccaggtgctgctgttggcgttcttgttcac
atgctaagaacagctccgcccctgcgccaagattcaagctgttactcttctgactccatg
aagcctgaacacgaggaaggagttactacagcttctggtttctttatgcctcgaaagact
tctgatgccctggaggagctcagaagttacagagaaatgaaagaccttctaatttcaaag
agtggaatgagggtgctcaccaaagaagaggcataa
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