Rosa chinensis (China rose): 112185014
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Entry
112185014 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112185014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112185014
04147 Exosome [BR:
rcn04147
]
112185014
04090 CD molecules [BR:
rcn04090
]
112185014
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112185014
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112185014
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112185014
CD molecules [BR:
rcn04090
]
Proteins
112185014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
ABC_ATPase
AAA_29
AAA_22
AAA
Zeta_toxin
AAA_16
AAA_25
AAA_21
SbcC_Walker_B
Rad17
Cytidylate_kin
nSTAND1
Motif
Other DBs
NCBI-GeneID:
112185014
NCBI-ProteinID:
XP_040364427
LinkDB
All DBs
Position
1:complement(67704013..67708635)
Genome browser
AA seq
1265 aa
AA seq
DB search
MVQPQPHEELMQHMEKKKQAIDEDVETKGSSSETLGFSKLLSYADGWDWIMMGLGTLGSV
VHGMAFPVGYLLLGRALDAFGNNINDTPAMVKALNKVIPYVWYMAFATFPAGILEVGCWM
YSSERQVARLRLAYLRAVLSQEVGAFDTDLTSGKVITGISNHTSIIHSAIGETLGHFLSS
FATFFSGILIAAICCWEVALLTLLVVPLILAIGATYTKKMNAVSAARMLYLAEATSMVEQ
TICQIKTVYAFVGENSAIKSFSNCMAKQYLLSKGEALVKGVGTGMLQSVTFISWAIIIWV
GAVVVTAKRASGGDIIAAVMCILFGAISLTYAAPDMQVFNQAKAAGTEVFKVINRKPAIS
YDSPGKELDKIYGNIDIHGVYFSYPSRPDRAILQGFSLSIPAGKTVAFVGSSGCGKSTII
SVVARFYDPPKGKILIDNHNIKDLDLKFLRKNIGAVSQEPSLFAGTIADNMKVGKMDAED
VEIQKASVMANVHTFISQLPDQYSTEVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEA
TSALDSESEKVVQEALDKAMQGRTVILIAHRLSTIVNADIIAVVENGQVSETGTHRSLLE
SSKFYNNLFNMQNLNPVHESRXITLKLSTVXDGPSEEHESIHQKNSPEQITRAKEPHSDQ
YPNQPPKQDEEEIRKQTIFFRIWFGLKTRELVKIAIGSFAAAFSGISKPVFGYYIITIGV
AYYHPDAKRKVSKYSITFALIGFISLFSHTLQHYFFGMVGEKAMTNLRRALYSGVLRNEI
GWYENPENGIGQLTSRIINDTSMVKLVIADRMSVIVQCISSILIATIVSMVVNWRMGLVA
WAVMPCHFIGGLIQAKSAKGFAGDSAAAHNELVSLASESAQNIRTVASFCHEDHILKKAE
ISLETPKRMSRKESIKYGIIQGVSLCLWNIAHAVALWYTTVLVHKNQSSFKDGIRSYQIF
SLTVPSITELWTLIPTVISAINVLTPAFETLDRKTAIDPSTPETSNWDRIKGNIEFQNVE
FNYPLRPEVSILNNFSVQIEAGKKVALVGPSGAGKSSVLALLLRFYDPLKGKILIDGKEI
REYNLRWLRTQIGLVQQEPLLFSSSIRHNICYGNESASETEIVEVSKEANIDEFISNLPD
GYETVVGEKGCQLSGGQKQRIAIARTLLKRPAILLLDEATSALDAESEKSVVSALEAINL
KKNGGLLSKTTQITVAHRLSTIIKSDIIVVMDKGEIVEMGSHSTLITASEGVYSRLYQIQ
SMGEE
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacctcaaccccacgaagaactcatgcagcatatggaaaagaagaaacaagca
atcgatgaggatgttgagacgaagggaagctcatccgaaacgttgggattcagtaagctg
ctaagctatgcggacggatgggattggattatgatgggattggggacgttgggttctgtt
gtccatggtatggcttttccagttggatatctactgctcggcagagcactcgatgctttt
gggaacaatatcaacgacacacctgccatggttaaagcactgaacaaggttattccatat
gtgtggtacatggccttcgccacatttccggctggaatacttgaagttggatgctggatg
tattcaagtgaaagacaagtggcacgtctaagactagcatatctaagagcagtgctcagc
caggaggttggggctttcgatacagacttaaccagtggaaaagtgatcaccggaattagt
aaccacactagtatcatacacagtgcaatcggagagacgttggggcattttctgtcaagt
ttcgcaactttcttttcggggattttgattgctgcaatatgctgttgggaagttgcactg
cttaccttgttggttgttcctttgattcttgcaatcggagccacttatactaagaagatg
aatgctgtctcggctgctaggatgctttacctggcggaagctacctctatggtagaacag
accatatgtcaaatcaaaacagtatatgcattcgttggagaaaactcggcaatcaaatct
ttctcaaactgcatggccaaacagtatttgctaagcaaaggggaggctctagtaaaggga
gttggaacaggaatgcttcaatctgtgaccttcatttcctgggctatcatcatttgggtt
ggtgctgttgtagtcactgccaagagggcaagcggtggagatattatagccgctgtcatg
tgcattctctttggagccatatcactcacttatgctgcgccggacatgcaagtcttcaat
caagcaaaggctgcaggaactgaagttttcaaggtgatcaatagaaagccagctataagt
tatgattcaccagggaaggaacttgacaagatttacggcaacattgacatacatggtgtt
tacttttcctacccttcccggcctgacagagccatccttcaaggcttttcattgtcaatc
ccagcaggaaaaactgtagcctttgtgggcagcagtggctgtggaaagagtactatcatc
tcagtagtcgcaagattctatgatccgccaaaagggaagattctgattgacaaccacaac
atcaaggatcttgacttgaaattcctgaggaaaaacataggagctgtttcgcaggaacca
tcactgtttgcaggcaccattgcggacaacatgaaagtcggtaagatggatgcagaagat
gtagagatccagaaagcatcagtgatggcaaatgtacacactttcatatctcaacttcca
gatcagtactccacagaggtaggacaaaggggagtccagttatctggaggccagaagcag
agaatcgccatagcaagagccattctcaagaatcctcctattcttctgcttgatgaggca
acaagtgctcttgactcggaatctgagaaggtggttcaagaagcacttgacaaggctatg
caaggaaggacagtcatcttgatagcgcacagactatcaactattgttaatgcagatatt
attgcggttgtggaaaatggacaagtttcagaaacaggaactcaccggagcttacttgaa
agcagcaaattctacaacaacttatttaacatgcagaacctcaacccagttcatgagtct
aggtaaattacacttaaactatctactgtataagatggtccctctgaagaacatgaaagc
atccaccaaaagaactcacctgaacagataacacgagctaaggagccccacagcgaccag
tatcctaatcagcctcccaagcaagacgaagaggaaataagaaaacaaaccatattcttc
agaatctggtttggcttgaaaacgagagaactcgtaaagattgctattggttcttttgca
gcagctttctctggcatatcaaagcctgtctttgggtattacattataacaataggagta
gcatactaccacccagatgctaaaagaaaagtctcaaaatattcaatcaccttcgctcta
attggattcatttcgttgttctctcacaccttgcaacattacttctttggaatggttgga
gagaaggccatgacaaacctgagacgtgctctctattcaggtgtgctacgcaatgaaatt
ggatggtatgagaaccctgagaatggcattggacagctcacctcaaggatcatcaatgac
acttcaatggttaaactggtaattgctgaccggatgtctgtcattgttcagtgcatctcc
tccatactgattgcaaccattgtgagcatggttgtcaactggagaatggggttggtagct
tgggctgtgatgccttgccacttcattggcggtctcattcaagccaagtctgccaagggt
tttgcaggagactcagctgctgcacataatgaacttgtttctcttgcttctgagtctgca
caaaacataagaaccgttgcgtcgttttgccatgaagatcatatactcaaaaaagccgaa
atatctctggaaacacccaagagaatgagcaggaaagaaagtatcaagtatggcataatt
cagggagtttctctttgcttatggaacattgcacatgctgtggcattgtggtacacaaca
gttttggttcataaaaatcaatcgagcttcaaagatggcataagatcataccagattttc
tctctcacagtaccttcaatcacagaattgtggacattgattcccactgtcatttctgcc
atcaatgtactcactcctgcattcgagacccttgaccgcaaaactgcaatagatccatct
acaccagaaacttcaaattgggacagaatcaaagggaacattgaatttcaaaacgttgag
tttaattaccctttgagaccagaagtaagtatcctgaacaacttcagtgtacaaattgaa
gctggtaaaaaggtagctcttgtcggtccaagtggagctggaaaatcttcagttctggcc
cttctgctaagattttatgatcccttgaaaggtaagatactcattgatggaaaggagata
agggaatacaatttgagatggctgagaacacaaatagggttggtgcaacaagagcctctt
ctttttagctcctcaatcagacacaatatctgctacgggaacgaaagtgcttctgaaact
gagattgtggaggtatcaaaggaagcaaacattgatgagttcataagtaatttgcctgat
ggatatgaaacagttgtcggggagaagggatgccaactttcaggaggacaaaagcaaaga
atagccatagctagaacactgctaaagaggcctgcaattttgcttctggatgaagcaaca
agtgcccttgatgctgaatctgagaaatctgtggtgagtgcattggaagcgataaatttg
aaaaagaatgggggcctgctgtcaaaaaccacacagattacagttgcacataggctttcc
acaataataaagtcggatatcattgttgtcatggacaaaggtgagattgtggagatggga
tcccactcaaccctaataacagcatctgagggagtttattcaagattatatcagatacag
agcatgggagaagagtaa
DBGET
integrated database retrieval system
