KEGG   Rosa chinensis (China rose): 112185084
Entry
112185084         CDS       T06020                                 
Name
(RefSeq) coatomer subunit beta'-2
  KO
K17302  coatomer subunit beta'
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112185084
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcn04147]
    112185084
Membrane trafficking [BR:rcn04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    112185084
Exosome [BR:rcn04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   112185084
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR19_1st NBCH_WD40 PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Nup120_160 WD_LRWD1 TPR_CcmH_CycH TPR_1 TPR_8 TPR_12 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 112185084
NCBI-ProteinID: XP_024179056
LinkDB
Position
2:complement(55423616..55433858)
AA seq 921 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTMAKSFEVTELPV
RSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKGCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLG
REVPVASMDNGGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFAWSSEGEYAVRESTSKIKIFTKNFQ
EKRSIRPTFSAEHIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDASFYILKYNRDVVSSYLDSGRPVDEQGVEDAFELLHEMNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERANELLPSIPKDHHNSVARFLESRGMIEDALEVATDPDYRFELAIQLGRLEIAEE
IASEVQSESKWKQLGELAMSTGKLEMAEQCLKHAMDLSGLLLLYSSLGDAEGISRLASLA
KEQGKNNVAFLCLFMLGRLEECLELLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK
VNPKAAESLADPEEYPNLFEDWQVALSVESRAAETRGVYPPAEEYVKHVDKTHMTLVEAF
RNLQVDEENLQMDEEQPRENGDSTHEVSELNGEQTVEEHAADQHEEGSQEEVVVVDADST
DGTVLINGNEAEEDWVLTPRH
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgcctctccgactggaaatcaagaggaaactagctcaaagatcagagagagtaaaatct
gtggatctacatccaacagaaccatggatattggcgagtctgtattcaggaacagtgtgt
atttggaactaccagactcagacaatggccaagtcatttgaggtcactgagttgccagtt
aggtcagccaaatttatatcacgcaagcaatgggttgttgctggagctgacgatatgttt
attcgtgtatacaactacaacacaatggataaggttaaagtatttgaggcccatactgac
tacattagatgtgtggctgtccatcctacgctcccatatgtgttatcatcatctgatgat
atgctcatcaagctatgggattgggacaagggttggatttgtactcaaatatttgaagga
cattcgcattatgtgatgcaagtgacatttaatcctaaagataccaacacctttgctagt
gcgtctcttgatcgcaccataaagatatggaatctaggctcccctgacccaaattttaca
ctggatgcccaccagaaaggtgtaaattgcgttgattactttacgggtggtgataaacct
tatctcattaccggttccgatgatcacactgctaaggtgtgggactatcaaacaaaaggt
tgtgtccagacacttgaaggccatacacacaatgtttctgctgtatgttttcatcctgaa
ctccctataataataacagggtcagaggacggaacagtacgaatatggcattcaaccact
tacaggcttgagaacacattgaattatgggcttgaaagagtttgggcgattggatacatg
aagggctcacgacgggttgtgattggttatgatgaaggaaccattatggtaaaacttgga
cgtgaagtacctgttgctagtatggacaatggtggaaagatcatttgggctaagcacaat
gaaattcaaacagtgaacattaagagtgtaggcgctgattatgaggttactgatggagag
agattgccattggccgtcaaggagttgggcacatgtgatctttacccccaaagcttaaag
cacaaccccaacgggaggtttgttgtagtttgtggagatggagaatacattatatatact
gctttggcctggagaaatcggtcgtttggttctgctttggaatttgcgtggtcatctgaa
ggagagtatgctgttagagagagtacttcaaaaattaaaattttcactaaaaacttccag
gagaaaaggagtattcgaccaacattttcagcagaacatatatatgggggaactttattg
gcgatgtgctcaaatgattttatttgcttttatgattgggctgagtgcagattgattcgg
agaattgatgtgaatgtgaaaaatctctattgggctgatagtggcgatttagttgccatt
gccagtgacgcatcattctacatcctgaagtacaatcgagatgtagtctcttcttatttg
gatagcggaagacctgtagatgaacaaggtgtagaagatgcatttgagcttctccatgaa
atgaatgaacgggtcaggactggtttatgggttggggattgcttcatttacaacaactcg
tcttggaggcttaattattgtgttggtggagaggtaactacaatgttccatttagaccgg
ccaatgtacttgttaggctatcttgccaatcaaagtcgggtgtatctgatagacaaagag
ttcaatgtgatggggtacacactacttttgagtttgattgagtataagacacttgttatg
cgtggagaccttgaaagggccaatgaacttttaccttcaattcctaaagaccatcataac
agtgtggctcgtttcttggaatcacgtggtatgatagaggatgcacttgaagttgctaca
gatcctgattacagatttgagctagccattcagcttggtagattagaaattgcagaggaa
attgccagtgaggtgcagagtgaatctaaatggaaacagctaggtgaactagccatgtct
accggaaagttggaaatggctgagcaatgtttgaagcatgccatggacttgagtggttta
ttactgctttattcatctcttggagatgctgagggaatctcaagacttgcatcccttgct
aaagaacaggggaagaacaatgttgcattcctttgtttattcatgttgggtcgattggaa
gagtgccttgagctgttagtcgaaagcaatcggatacctgaggctgctttgatggctcga
tcatatcttccaagcaaggtctcagaaatagtagctatttggagaaaagaccttagcaag
gttaacccaaaagctgctgaatctttggctgatcctgaagagtatcctaatttgtttgag
gattggcaagttgctctgtcggttgaatctagagctgcagagacaaggggtgtttatcct
cctgcagaggagtacgtgaaacatgttgataaaacacacatgacccttgtggaggctttc
aggaacttgcaagtggatgaagagaacttgcaaatggatgaagagcagccccgagaaaat
ggagactcaacgcatgaggtttctgaactgaacggggaacagactgtagaggaacatgca
gctgaccagcacgaggaagggagccaggaggaggttgttgtggtggatgctgattctacg
gatggcactgtactcattaatggtaacgaagctgaagaagactgggtgcttacaccacgt
cactag

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