Rosa chinensis (China rose): 112185208
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Entry
112185208 CDS
T06020
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112185208
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
AAA_22
AAA_16
Rx_N
AAA_14
LRR_R13L1-DRL21
AAA_33
LRR_8
NACHT
ABC_tran
cobW
ATPase_2
KAP_NTPase
ATP_bind_1
AAA_18
TsaE
ORC-CDC6-like
NA-iREase1
AAA_28
NTPase_1
Sigma54_activat
AAA
Septin
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
112185208
NCBI-ProteinID:
XP_024179181
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All DBs
Position
2:82521674..82524416
Genome browser
AA seq
862 aa
AA seq
DB search
MADAISAALLLVETAIICTDQLHSRTSSVRKDLERARNCLARLQQWDNHTNPQAREKQVQ
DLACNIEDAINEYLLQVSQHSHTNRFSKLAHNVGHFIPDWIASSKLSSSIDELERDLNLV
TLLDSVHSNGPQEGRPSSSTGPQGATLTHRFLEDHEIVGYDEEKTRLFQHLGERNPELLT
IVIVGPGGSGKTTLVKNVYQSERVSSLFHFQAWIDVPLDLDQLLPKLLRRFKQEVDPHED
ISDLQEKLRRILENKKFLVVLDNVWSHEAFESIVNALPKTEGSKLIVITRNIDVAPVSSN
YIHDLCAGLSSKKANQLFCKKAFPDVVRNICPTHLEDWAEQIVTRCEGMPWAISQIGTLL
ARTPRVAVEWKKMHDTLGSDLSIASSISHYRDLPSNHKECFLYFVRGKSMDESRIVVFPT
LFVSSSFPKQSISSLFLEAKSVGNIVRDSGEKIRRLSVQCDINLLRNIDLSRMTHTRTLL
VFRQTANRSELHMVLKACKLLRVFGLQGVPELVNFPESVISLTLLRYLSVRQTNIESVPR
SIEKLGLLETLELKDTLVTNLPKGIGKLHHLRHLLVYCNAVNNNMMFGAAQGVEFSTSKI
SALSISNSLQKLSLIKVNTNKKFLKALGELKDLRRLGLVDLHREDGRELCCTIQKMDDLS
TLDVRATSEDEYLDLDHMQSGSPPLLLQHLYLKGRLKRVPEWIPKLTSLKKIGLKWSKMD
ADAEPLTALQDLPNLMELDLVDYYTGQVLGFGDETFKKLVALSIDKFDKLNLISIGEKAM
PMLKKLTISRCPDLKLLPFSSGDLELLEELLLFDMPNEFIAEFETDSERREDLKHVGVIH
YSRHPGSYQSDGFKDLSPSKWR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctatttcagccgcattgctgttagttgagacggcgataatctgcaccgac
caattacacagtcgtacgagtagtgtccgtaaggatcttgaaagggcccggaattgtttg
gcgaggttgcaacagtgggataatcacacaaatccccaagctagggagaaacaggtccaa
gatttggcttgtaatattgaggatgctattaacgagtacctgcttcaggtttcacagcat
tcccataccaatcggttctctaagctggcgcacaacgttggtcatttcatccccgactgg
atagcaagcagtaagttatcctccagcattgatgaactggaacgagacctgaatttggtt
acgttactagattcagtacattcaaatggtccccaagaaggccgcccaagctccagcaca
ggacctcagggggcaactttgacccacagatttcttgaagaccatgaaatagtgggctat
gatgaagagaaaacacgacttttccaacacttgggagaaagaaatccagagcttttgaca
attgtgattgtaggtcctggaggctccggcaaaactacactcgtaaagaatgtttaccaa
agcgaaagggtcagcagcttgtttcattttcaagcttggattgatgtgccactcgatctt
gaccaactcctgccgaagttgttaagaagatttaagcaggaagtagatcctcatgaagat
atcagtgaccttcaagagaaactgagaagaattttggagaataagaagtttttggttgtc
ctggataatgtttggagccacgaagctttcgaatccattgtaaatgcactaccaaaaacg
gagggtagtaaactaatcgtaattactcggaacattgatgtagctccggtttcttccaat
tatattcatgatttgtgtgctgggttatcatcgaagaaagccaaccagctattctgcaag
aaggcctttcctgatgttgtacgaaatatttgtccaacccatctggaggactgggctgaa
cagattgtaacgaggtgtgaaggtatgccctgggcaatttcacaaatcggcactttgcta
gcaaggacgccgagagtagcagttgagtggaagaagatgcatgacacactaggatccgat
ctctccattgctagcagtatttcacattatagggatctgccaagcaatcacaaagaatgt
ttcctgtacttcgtgcgagggaaatcgatggacgagtcaagaattgtcgtgtttccaacc
ttgttcgtgagttcatcatttccaaagcaaagcatttcatcactgtttttggaagccaag
agtgttgggaatattgttcgggattcaggtgagaaaattcgacgcctttcagttcagtgt
gatatcaatttgttaaggaacatagacctgagtcgtatgactcatactcgtaccttacta
gttttccggcagacagccaataggtctgagcttcatatggtgcttaaagcctgtaagctc
ttacgggtcttcggtttgcaaggtgtacctgaattggtgaactttccggaatctgtaatt
agtctcaccttattaaggtacttgagtgtcaggcaaaccaacattgaaagtgttccaaga
tccatagagaagcttggattgttggaaaccttagaacttaaagacaccctggtgaccaat
ttgccaaaagggattggtaaactccaccatttgcgccaccttttggtgtattgcaatgct
gtcaacaataatatgatgtttggagctgcacaaggagtggagttttctactagcaaaata
agtgctttatctatttcaaattcgttacaaaagttgtctctgattaaggtaaacaccaac
aaaaaattcttgaaagccttaggagagttgaaagatcttagaaggttggggctggtagat
cttcatagagaagatggaagagaattgtgttgcaccattcagaaaatggatgatctttcg
acattggatgtaagagcaacaagcgaggatgaatatcttgacttggatcacatgcaatcc
ggctccccgcctctccttctccaacatctatatttaaaagggcggctaaaaagggtacca
gagtggattcccaagcttaccagtctcaaaaagattggtttaaaatggtcaaagatggat
gctgacgctgagccacttacggcccttcaagatttgcccaacctcatggagctcgatttg
gttgactattacactggccaggtgttgggtttcggagatgaaactttcaagaaactagtg
gcattaagtatagacaaatttgataagctaaatttgatctcaataggtgagaaggcaatg
cctatgctcaagaagctaaccatctcgagatgtccggatttgaagttacttccattttca
agtggtgatcttgaattgctggaagaattgcttctatttgacatgcccaatgaattcatt
gctgagtttgaaacagacagcgaacgacgtgaggatttaaagcatgttggagtcattcat
tattctcggcatccaggaagctaccaatctgatggattcaaagatctttctccatcaaaa
tggaggtaa
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