Rosa chinensis (China rose): 112185339
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Entry
112185339 CDS
T06020
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03008
Ribosome biogenesis in eukaryotes
rcn03013
Nucleocytoplasmic transport
rcn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112185339
03008 Ribosome biogenesis in eukaryotes
112185339
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112185339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112185339
03009 Ribosome biogenesis [BR:
rcn03009
]
112185339
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112185339
03036 Chromosome and associated proteins [BR:
rcn03036
]
112185339
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112185339
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112185339
Pre-60S particles
112185339
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112185339
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112185339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
Motif
Other DBs
NCBI-GeneID:
112185339
NCBI-ProteinID:
XP_024179348
LinkDB
All DBs
Position
1:complement(68056946..68066247)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVGLLDATVSAFYGTGSKEERAAADLILRDLQNNPDMWLQVVHILQS
TNNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVQLSSNEASFRSERLYVNK
LNIILVQILKHDWPVKWRSFVPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSVSQRTELMRATLSTLHAFLSWIPLGYIFESPLLET
LLKFFPMPQYRNLALQCLTEVAALTFGDFYNAQYVKMYTIFMVQLQTILPTTTNIPEAYA
NGSGEEQAFIQNLALFFTSFYKSHIRVLETNPENVNALLMGLEYLISISYVDDTEVFKVC
LDYWNSLVLELYEAHNNLDNPAATANMMGLQMPMIPGMVDGLGSQIMQRRQIYVSIMSKL
RLLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLAHLDHDDTEKQM
LKKLSKQLSGEDWAWNNLNTLCWAIGSISGSMAEEQENRFLVMVIRDLLNLCEIIKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGESEPFVSELLTGLPTTVGDLEPHQIHTFYEAVGHMIQAESDPQKRDEYLHR
LMSLPNQKWSEIIGQARQSVEVLKDQEVIRTVLNILQTNTSVASSLGTFFLTQISLIFLD
MLNVYRMYSELVSSTIAEGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQSHIGKQI
VPPMLDPVLGDYARNLPDARESEVLSLFATIINKYKIEMIDDVPRIFEAVFQCTLVMITK
NFEDYPEHRLKFFSLLRAIAAYCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQKSEFCNQFFRTYYLQIEQEIFAVLTDTFHKPGFKLHVLVLQQLFCLVESGP
VTEPLWDVAVVPYQYPNNAMFVREFTIKLLSDSFPNMTSIEVTQFVNGLFESKNDLATFK
DHIRDFLVQSKEFSAQDNKDLYAEEAAVQRERERQRMLSIPGLVAPNEIQDEMVDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagaagcttagggatttgagccagcccattgacgttggcctactcgatgcc
accgtctcggcgttctacggcaccggatctaaggaggagagggcagctgcagacctgata
ttgcgggacttgcaaaacaatccggatatgtggctccaagtggtgcacattttgcagagc
accaataacctcaacaccaagttctttgctttgcaggtcctagaaggggttatcaagtat
aggtggaatgcattgcccgttgaacagagagatggaatgaaaaattatatctctgatgtc
attgtgcagctttcaagtaatgaggcctcttttagaagcgaaaggctgtatgtcaacaaa
ctcaatatcatattggttcagattttgaagcatgattggcctgttaaatggcgaagcttt
gttccagatctcgtttcagcagctaaaactagtgaaacaatctgcgagaattgtatggct
atattgaaacttttaagtgaagaggtctttgatttctcaaggggagaaatgactcagcag
aagattaaagagcttaaacagtcattgaacagcgagtttcaacttattcatgagttatgc
ttgtacgtactatctgtatctcaaagaactgagcttatgcgtgcaacactatcgacatta
catgctttcctctcatggattcccttgggttatatttttgagtcccctttgcttgaaacc
cttctaaagtttttccccatgcctcaatatcggaatctcgcccttcagtgtttaacagag
gttgcagcacttacattcggtgacttctacaatgctcagtatgttaagatgtatacgata
ttcatggtgcagttacagactattctcccaactaccacaaacatccccgaggcttatgca
aatggatctggcgaggaacaggcatttattcagaacttggcactgttcttcacttcattt
tacaagtctcatattcgtgttctcgaaaccaacccagaaaatgtaaatgcgttgctaatg
ggtctcgaatatcttataagcatctcatatgtggatgacacggaagtttttaaggtttgc
ttagactattggaactccttagttttggaactatatgaggcgcataataatttggataac
cctgcagcaacagcaaacatgatgggactgcagatgcctatgattcctggtatggttgat
ggccttggctcacaaattatgcagaggaggcagatatatgttagcatcatgtcaaagttg
aggctgctcatgatctgtcgtatggctaagccagaagaggtcctcattgttgaagatgag
aatggcaacatcgttcgtgagacccttaaggacaatgatgttcttgtccaatataagatc
atgagggaaacattaatatatttggcacaccttgaccatgatgacactgagaagcagatg
ctaaagaagttaagcaaacaactgagtggcgaggactgggcatggaacaacttaaacaca
ttatgctgggcaataggatctatatctggttccatggcggaagaacaggaaaacagattt
ttggtgatggtgattcgtgacttactgaatttatgcgaaatcataaaagggaaagataac
aaagctgtgattgcaagcaacattatgtatgttgttggacagtacccaaggtttttaaga
gctcattggaagttcctaaagactgttgtgaataagttgtttgaatttatgcacgaaaca
catcctggagttcaggacatggcttgtgacacattcctcaaaattgttcagaagtgcaag
cgtaaatttgttattgtacaggttggggaaagcgaaccatttgtgtctgaactcttgaca
ggcctccctacaactgttggtgatcttgagcctcaccagattcatactttttatgaagcg
gtcggtcatatgattcaagcagaatctgatccccaaaagagggatgaatatttacacaga
ttgatgagtctcccaaatcagaaatggtccgagatcattgggcaagcacgccaaagtgtc
gaagttcttaaagatcaggaagtgattcgaaccgttcttaatatattacagacaaataca
agcgttgctagctctcttggaacatttttcctaacccagatttcattgatctttttggac
atgcttaatgtctacaggatgtatagtgagcttgtatctagtaccattgctgaagggggg
ccttttgcttctaaaacatcctatgtgaaacttctaaggtcggtcaagagggagactctc
aaactgatcgagacattcctggacaaggctgaagaccaatcacatataggaaaacagatt
gtgcctccgatgctggatcctgtccttggtgactatgccaggaatttgcctgatgctaga
gagtcggaagttttatcactttttgccacaattataaacaagtacaaaattgagatgata
gatgatgtgcctcgcatatttgaagcagtttttcagtgcacattggtgatgattacaaaa
aactttgaagattatccagagcatcgcctgaagttcttttcgttacttcgtgccatcgct
gcatactgttttcctgcgttgattagattatcgagtcagcaactaaagcttgtcatggat
tcaattatttgggcatttcggcacacagaaagaaatattgctgaaactgggctgaacctg
ttattggagatgctgaagaactttcagaaatcggagttctgtaatcaatttttccggaca
tactatttgcaaattgagcaagaaatctttgctgtcttgacggacacgtttcataagcct
gggttcaagttgcatgtcttggtgctccaacagttgttttgccttgtagaaagtggtcca
gtgacggagcctctgtgggatgttgcagtggttccttatcaatatccaaataatgcaatg
tttgttcgggaattcaccatcaagcttttgagtgattccttccccaacatgacttccata
gaggtcactcaatttgtgaatggactattcgagtccaagaatgacttggccacatttaag
gatcacatccgagactttctagtgcaatcaaaagaattttcagcacaggacaacaaagat
ctttatgcagaggaggctgctgtacaaagagaaagagaacggcaacggatgctttctatt
ccggggctcgttgcccccaatgagatacaagatgaaatggttgattcctag
DBGET
integrated database retrieval system
