Rosa chinensis (China rose): 112185408
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Entry
112185408 CDS
T06020
Name
(RefSeq) two pore calcium channel protein 1A isoform X1
KO
K16900
two pore calcium channel protein, plant
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112185408
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
112185408
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GFIT
Motif
Pfam:
Ion_trans
EF-hand_7
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
112185408
NCBI-ProteinID:
XP_024179418
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Position
2:41087771..41103251
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AA seq
740 aa
AA seq
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MEDPLLNGEGSSSPRRRGDLSRAKSFKRRSDAITFGSSYQKAAALVDLAEDGIGLPEQIL
DLSSFHSSAKYYFLYVRFSFLWALLYFALLILNFLEKPLWCATYTDHTCSDRDYYYLGQL
PYLTPTESLIYEGITLIVLMVHIFFPISYVGFRLYWNSPLTHFKVICLLILVADLLAYVL
YLSPVAFDSLPLRVAPYIRVIFFILNFRELRSCMLILAGMFGTYLNVLGLGLLFLLFSSW
LAYVMFEDTDQGTLVFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLLG
VYFVTNLILAVVYDSFKSQLVKQVSEMDQTRKTILKKAFHLIEKDNAGYINKDQCIRLFE
ELNKYRTLPKISREEFELIFDELDDSGDFKINLDEFTDLCNAIALRFQKEDTPSWFEKVP
SFYHSPFSEKLKAFIRSPKFGYIISFILIINLSAVIVETTLDIENNSAQKVWQSMEFILG
WVYVLEMALKVYSFGFENYWRDGQNRFDFLVTLIIAIGETLTFAAPEGLTFLTNGEWIRY
LLIARMLRLIRLLMHVQRCRAFIATFLTLIPSLMPYLGTIFCVMNIYCTLGVQIFGGIVN
AGNANLEATDLYDNDYLLFNFNDYPNGMVTLFNLLVTGNWQDWMQSYKALTGTSWSLLYF
VSFYLITVLLLLNLVVAFVLEAFFAEMDLESAEICENHKEVERVKGRHRSIGSKSRSQRV
DTLLHHMLSAELNETQSSSA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccattgcttaacggagaaggcagtagtagtccccgacgccgcggcgatctg
tccagggccaagagcttcaaacgccgctccgatgccatcaccttcggctcttcttatcag
aaagcagccgctctcgtcgacttggcggaagacggcattggcttacctgagcagatactt
gatctctcatcttttcatagctctgcaaaatactacttcctttatgtgcgattcagcttc
ctctgggccctactctacttcgccctcttgattctcaatttccttgagaaacctctgtgg
tgtgccacgtatactgatcatacttgcagtgacagggattactactatctcggccaattg
ccctacttgactcctacagagtcccttatttatgagggcataacactgattgtgctcatg
gtgcatattttctttccaatttcatatgtggggttccgtctctattggaatagtcctctt
actcatttcaaggtcatatgcctgttaattttggttgctgatttgctggcttatgttctc
tatttgtctccagttgcctttgattctctccctttacgggttgctccatatatcagagtc
atctttttcatattgaactttagggaattacgatcgtgcatgctcatcttggctggaatg
tttggcacatacttgaacgtcttgggtttagggcttttatttcttctgttttccagttgg
ctagcttatgtcatgtttgaagatactgaccaggggacattggtatttacttcatatggt
accacattatatcagatgtttgtattattcaccacatccaacaatccagatgtctggata
ccagcctacaaggcttcacgttggtattgcttgttttttgttctgtacgtgttgctagga
gtctattttgtcacgaatttgatccttgccgtcgtgtatgacagcttcaaaagtcagctt
gtaaagcaagtttctgagatggaccagacgaggaaaactatactgaagaaagcctttcat
ttaatagaaaaggataacgctggatatatcaataaggaccagtgcatacgtttgtttgag
gaactaaacaaatacaggactttgccaaaaatatcaagagaagaatttgagctgatattt
gatgagctggatgacagtggagacttcaagatcaacctagacgaattcactgacctctgt
aacgccattgccctaagattccagaaggaggatactccatcttggtttgaaaaggtccct
tcgttttaccattctcccttctcagagaagttgaaggcctttattcggagccccaaattt
ggatacataatatccttcatactcataatcaatctatctgctgttatagttgaaactacg
cttgacatagaaaacaattctgctcagaaggtatggcaatcaatggagtttatccttggg
tgggtatatgtactggaaatggctctgaaagtctattcatttggatttgagaactattgg
agggatggccaaaatcggtttgattttctggtcacattgattatagctattggagaaacg
ctaacttttgctgctccagaaggactaactttccttacaaacggagaatggattcgctac
ctcctcattgcaaggatgttacgattgattaggctcctgatgcatgtccagcgttgccga
gcctttatcgccacattcttaactcttataccaagtttgatgccataccttgggaccata
ttttgtgtcatgaacatctattgtacgcttggtgtacagatcttcggcgggattgttaat
gctggaaatgccaatttggaagcaacagatctttatgacaacgactatctacttttcaac
ttcaatgactatccaaatgggatggtgacacttttcaatttactagtcacgggaaactgg
caagattggatgcagagttacaaggctttaacaggaacttcttggagccttctatatttt
gtcagtttctatcttataaccgtcttacttctactgaatttggttgtggcttttgtcctg
gaggctttctttgctgaaatggatctcgagtctgcagaaatttgtgaaaaccataaggag
gtggaacgagtaaaaggccgacatcgatccatagggtcaaaatcacggagccagagagtt
gatactcttcttcatcatatgttgagtgcagagctaaatgaaacgcagtcctccagtgca
tag
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