KEGG   Rosa chinensis (China rose): 112185417
Entry
112185417         CDS       T06020                                 
Name
(RefSeq) uncharacterized protein LOC112185417
  KO
K03873  elongin-B
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112185417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112185417
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112185417
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     112185417
   Cul5 complex
     112185417
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112185417
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 GABP-alpha Rad60-SLD_2 Ubiquitin_2 UN_NPL4
Other DBs
NCBI-GeneID: 112185417
NCBI-ProteinID: XP_024179436
LinkDB
Position
2:759382..762248
AA seq 103 aa
MAMYIRVKRSKTTYFIQCEPTETILDIKQKLQNLIDQPVNDQRLILVSTGEVLEDSKTLA
DQKVENDGVVALTLRKDDDEFEEVNIVRPDDFYQSRDADASSW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggccatgtatatccgtgttaagcgtagtaagacaacttactttatccagtgtgaacca
accgagacaattttagatattaagcagaaattgcaaaatcttattgatcaaccggtaaat
gatcagcgcttgatcctagtcagtactggggaagtactggaagattcaaagacgttggca
gatcaaaaggtggaaaatgatggcgttgtagcactgactttgagaaaagatgacgatgag
tttgaagaagtgaacattgtacgaccagatgacttctaccaatctcgtgatgcagatgca
agcagttggtga

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