KEGG   Rosa chinensis (China rose): 112185599
Entry
112185599         CDS       T06020                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    112185599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rcn03036]
    112185599
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     112185599
    NSL complex
     112185599
   HMT complexes
    COMPASS/SET1 complex
     112185599
    COMPASS/SET1 complex (yeast)
     112185599
    MLL-HCF complex
     112185599
    MLL3/MLL4 complex
     112185599
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     112185599
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_WDR19_1st WD40_like Beta-prop_NUP159_NUP214 eIF2A Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_HPS5 RMC1_N Beta-prop_WDR35_TULP_N VPS8_N WD_LRWD1 PALB2_WD40 KNTC1_N PROPPIN Beta-prop_LRRK2 DUF5888 WDR54
Other DBs
NCBI-GeneID: 112185599
NCBI-ProteinID: XP_024179633
LinkDB
Position
2:complement(21009592..21012181)
AA seq 322 aa
MEAMSTEPSDYKPYTLFETLTGHNSAISGVKFSSDGRLLGSSSADKTIRTYSLSSSSSDS
PGPTITPAQTFEGHDQGVSDLAFSADSRFMVSASDDKTLRLWDVETGDLIKTLSGHTNYV
FCANFNPQSNMIVSGSFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGSIIVSSSYD
GLCRTWDASTGHCTKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFQTGKCLKTY
TGHKSSKFCISSTFSVTNGKYIVSGSEDHCLYLWELQSRKIVQKLEGHTDTVISVSCHPE
KNIIASGALGNDKTVKIWTQEN
NT seq 969 nt   +upstreamnt  +downstreamnt
atggaggcaatgtcgacggagccatcggattacaagccctacaccctgttcgaaacccta
accggccacaacagcgccatctccggcgtcaaattctcctcggacggccgcctcctgggc
tcctcctcggccgacaaaaccatccgcacctactccctctcctcctcctcctccgactcc
cccggtccgaccatcacccccgcccagaccttcgagggccacgaccagggcgtctcggac
ctcgccttctccgccgactcccggttcatggtctcggcctccgacgacaaaaccctccgc
ctctgggacgtggaaaccggcgacctcatcaaaaccctcagcggccacaccaactacgtc
ttctgcgccaacttcaatccccagtccaacatgatcgtctccggctcgttcgacgaaacg
gtgcgtatttgggatgtcaagaccggaaagtgcctcaaggtgttgccggctcactccgat
cccgtcacggccgttgatttcaatcgggacggctcgattatcgtttcgagtagctacgac
gggctgtgtaggacctgggatgcttccaccgggcattgcaccaagactttgattgacgat
gagaatcccccggtttcgtttgtcaagttctcccctaatggcaagttcattcttgttggc
actttggataatactctgaggctttggaactttcaaaccggcaaatgtctaaagacttac
acaggccacaagagttcaaaattctgcatttcttccaccttttctgtgacaaatgggaaa
tacattgtaagcggttctgaagatcattgtttatacttgtgggaattgcaaagcaggaaa
atagttcagaaattggaaggtcacactgatactgttatatcagtttcatgtcaccctgaa
aagaacataattgcatctggtgcacttgggaatgataagaccgtgaagatctggactcaa
gagaactga

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