Rosa chinensis (China rose): 112185668
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Entry
112185668 CDS
T06020
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X2
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112185668
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112185668
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112185668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
AAA_22
IMS_HHH_1
HHH
Motif
Other DBs
NCBI-GeneID:
112185668
NCBI-ProteinID:
XP_024179709
LinkDB
All DBs
Position
2:complement(85921667..85956521)
Genome browser
AA seq
1203 aa
AA seq
DB search
MDSYTLKSMADLPAPFRACFNFRYFNSLQSECFPACFHSDVNMVVSAPTGSGKTVIFELC
ILRLLSRFISEDGRFTPTNGTLKTIYIAPSKALVQEKVRDWTQKFGSRGIVCLELTGDNE
SYNTRSLQEADIILTTPEKFDAVTRYRVKDGGLGFFSDIALLLIDEVHLLNDPRGAVLEA
IVSRIKMLAYNPEMKSSALAHVRFLAVSATIPNIEDLAEWLKVPVQGIKRFGEEMRPVKL
TTKVFGYAPAKNDFLFEKRLQNYIFDILMQYSRGKSALIFCSTRKGAQEAAQILSQTVMA
FGHSNPFIKSREQQERLREASLSCSDKQMQSYMIYGVGYHNGGLCLKDRNLIESLFLKGD
VQILCTTNTLAHGINLPAHTVVIKSTQHFNKEKGVYMEIDRSTLLQMCGRAGRPPFDDTG
MVIIMTRRDTVHLYENLLNGCEMVESQLLSCLTEHLTAEIVQLTVSDITRAIEWMKCSFL
YVRMKKNPGHYAVRKVISNDRIEKHMLEVCVQKVNELSQHQMIWTDEDGFLLKPLEPGRL
MTKYYLKFDTMKYIIQTHANCSLEDALHVICRAEEISWIQLRRNEKKLLNDINTDKDGRL
RFHILGDKGKRKKRIQTREEKIFLLANDCLTGDPSVHDLSLTQDMNSICSNGCRIARCMK
EFFIYQKNYKGALNSMLLAKSMYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVKSFETLA
EADPRRIEIVTGRKYPYGNHIKESLLSLPPNVELKVEETECRGQGKLKLAVTLTRLSQTL
QSTKRHYADMIVGSEEDNLVLFHEKIRVDEFSSPYSATVLLSNPQQGKLTVKADLIFEEY
IGIDLNQELILMKKSNLSANNKRGKKAPSLPLPEEVCIIEDDIYEGPSEVLPNSTKSKRV
DGPMPSFKLLDEDSEEDEVANKVHEDEIAAKFQTDDKVVTQQTVFDHIREKAKNFPVLVS
SNSVLPPSSEPLELARKRAREKKLGPESGVEVLEELEWNKVQRRTVVNPSSELKEAEQHL
SSIKNHPNPRSSAALNVMDGRGETIFEHIRTKAKNFPVINKPNVEEAESLIQTKQRLYKT
EPEFSMDITAVLKGRKPNEVIRDTECDGRLLSGSSCNPHGILNASPGGLSNGANLSSSNM
PSFDISMFKNPKRPADPASTMENTRKKHQHSPIVPPRHCSLTAAGKSREVETFLGFESVF
SFL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtatacacttaagtccatggcagacttgccggctccttttcgagcatgtttt
aattttaggtatttcaactctttgcagagtgaatgctttcctgcatgtttccactcagat
gtgaacatggttgtgtcagcgccaactggaagtggtaaaacagtcatttttgagctttgc
attttgaggcttctttcaagattcatctctgaggatgggaggtttacacctacaaatgga
actctcaaaacaatctatattgccccatcaaaggctttagttcaggagaaggttcgtgat
tggacccagaagtttggatctcggggcatagtttgcttggagctcaccggagataatgaa
tcttacaacaccaggagtttacaggaagcagacattattttaaccactcctgagaaattt
gatgctgtaacgcggtatcgcgtaaaggatggtggattgggctttttcagcgatattgca
cttctacttattgatgaagttcatctgttgaatgatcctcgtggagcagttttggaagcc
atagttagcagaataaaaatgcttgcttacaaccctgaaatgaagtcaagcgctctggct
catgttcgttttctagctgtgtctgccaccattccaaatattgaagaccttgcggagtgg
ctcaaggtgcctgtccaagggattaaaaggtttggagaagaaatgaggcctgtaaagctg
actacaaaagtttttggctacgccccagcaaaaaatgattttctatttgaaaagcgcctt
caaaactatattttcgatatccttatgcaatattcaagagggaagtccgctctaattttt
tgctcaactagaaaaggtgcacaagaagcagcacagatactttctcagacagtcatggcc
tttggtcattcaaatccattcattaaaagcagagaacagcaagagaggctaagggaagct
tcattgtcatgcagtgacaaacaaatgcaatcttatatgatttatggtgttggttatcac
aacggtggcctttgcctcaaggatcgcaatctcattgaaagtctttttcttaagggtgat
gttcaaattctgtgcacaacaaatactcttgctcatggaatcaacctaccagcacataca
gtagtcataaaatcaacacagcacttcaacaaagaaaaaggagtctacatggaaattgac
cgatctacactgctacagatgtgtgggagggcaggtcgcccaccttttgatgatacagga
atggttataatcatgacaagaagagatacggttcacttgtatgagaatctcttgaatgga
tgtgagatggtggaatcacaattgctttcatgtttgacggagcatttaactgcagagata
gttcaactgactgtctctgacattacaagggcaattgaatggatgaagtgctctttcttg
tatgtgagaatgaagaagaatcccggacactatgcagttagaaaagtgatttccaatgat
cgtatagaaaagcatatgctagaggtctgtgtacagaaagttaatgagttgtcgcagcat
cagatgatatggactgatgaagatggttttctgttgaaaccactagaacctgggaggctg
atgacgaagtactacttgaaatttgacacaatgaaatacattattcagacacatgcaaac
tgcagcttggaagatgcgcttcatgtgatatgccgtgctgaggaaatttcatggatacag
ctcaggcgcaatgagaaaaagcttctaaatgacataaacactgataaagatggtcgactt
cgctttcacattcttggtgataaagggaagcgaaaaaagcgtattcaaaccagagaagaa
aagatatttcttttggctaatgactgcttgactggtgatccatcggttcatgatttatcc
cttacccaggatatgaactccatatgctcaaatggctgtagaattgccagatgcatgaaa
gaattttttatttaccaaaagaattacaaaggagccttgaactcgatgcttttggcaaag
tctatgtatcagaaactctgggatgacagtccatacttgctgaaacaattaccagggatt
ggaatggtgactgcgaaggcactacattcgatgggagttaaatcatttgagacactagct
gaggctgatcctaggagaattgagatagtcactggtcgaaaatacccatatgggaaccac
ataaaagagtctctactgtctctacctccaaatgttgagttgaaagttgaggaaactgaa
tgccgggggcaagggaaactgaagctagcggtgacactgactaggctatcacagacactc
caatcaacaaaacgacattatgctgatatgattgtaggttcagaagaagataacctggtt
ctctttcatgagaaaataagagttgatgaattctcgagcccctatagcgcaacagttctc
ctgtcaaatccccaacaaggaaagctgactgttaaggctgatcttatatttgaagaatac
attggtattgatctaaaccaggagcttatcttaatgaagaaaagcaatttaagtgcaaat
aacaaacgaggaaaaaaagcaccctctcttcctctacctgaggaagtatgtatcatagaa
gatgatatttatgaaggcccaagtgaagtgcttccaaactcgacgaaatccaaaagggta
gatggtcccatgcccagtttcaagcttctagatgaagactctgaagaagatgaggttgcc
aacaaagttcatgaagatgagattgctgccaaatttcaaactgatgacaaagttgtgaca
caacaaacagtatttgaccacatacgtgaaaaggcaaagaacttccctgtcttggtgtcc
tcaaatagtgtgcttcctccatcatcagagcccttggaattagcaaggaaacgtgctcgt
gagaagaagcttggaccggaaagtggagtagaggttctggaagaattagaatggaataaa
gttcaaagacgaactgtggtcaatccatcttcagaacttaaagaagcagaacaacatctt
tctagtatcaaaaatcatccaaatcccagaagctcagctgccctgaacgtcatggatggc
agaggagaaacaatattcgagcacatacgcacaaaagctaagaattttccggtgatcaat
aaaccaaatgtggaggaggctgagtctttaatccagacaaaacaacgcctatataagact
gaaccagagtttagcatggatattactgccgtgctgaaaggaagaaaaccaaatgaggtt
atcagagatactgaatgtgatgggaggttgctctccggaagctcctgcaaccctcatgga
atattgaatgcttctcccggaggtttaagcaatggagccaatctctcatcaagtaacatg
ccatctttcgatatctccatgttcaagaatccgaagcgacctgcagatccagcaagcact
atggagaatactaggaagaaacatcaacactctccaattgtaccaccaaggcactgctcg
ttgacagcagctggaaaatccagagaagtagaaacatttcttgggtttgagagtgtgttt
tcctttctctga
DBGET
integrated database retrieval system
