Rosa chinensis (China rose): 112185696
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Entry
112185696 CDS
T06020
Name
(RefSeq) protein SHORT INTERNODES isoform X1
KO
K27807
short internodes/stylish family transcription factor
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112185696
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112185696
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
112185696
NCBI-ProteinID:
XP_024179740
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All DBs
Position
2:complement(12245944..12250192)
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AA seq
389 aa
AA seq
DB search
MAGFFSLGGGGGGGRSSHNPESRNQNQPESSEIPPETLFWYKNEEGMPFKGSFELWQHQQ
QQLQHHQHQQHQLQQLQLQQDLYASAAALGVGPSSINVSDESSSRPFMMMRPSSSGGGGG
GGGGGSTSGSTVSCQDCGNQAKKDCVHMRCRTCCKSRGFDCATHVKSTWVPASKRRERQQ
QHLTALQQQQQQHTQQEVQVIRGGGENPKRLRENSNNNPNNPSSNSSLGACTRIITNTSG
LEVGNFPAEVTSPAVFRCVRVSSIDDDEDQYAYQTAVNIAGHVFKGILYNQGPDTNYNMS
TAGESSSGGGGGGGGGGGGGGVIQPLNLINAAPTTVGSGGVTVAAASGSGTLMDPNSLYP
VNPFMASGDHSWNLRLRSALPQTPTCEQF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctggatttttctcattaggcggaggaggaggaggaggtcggagcagtcacaaccca
gaaagccggaatcagaatcaaccggaatcaagtgaaattccgccagagacgttgttttgg
tacaagaatgaagagggcatgccgttcaaaggaagcttcgagctatggcagcaccagcag
cagcaactccagcatcaccagcaccagcagcaccagctccagcagctccagctccagcaa
gatctgtacgcctcagcagctgctctaggcgtcggtcccagcagcatcaacgtctccgat
gagtcgtcgtcgcggcccttcatgatgatgagaccctcctcgtccggcggcgggggagga
ggaggtggaggtggatcgacgtccgggagcacggtcagctgtcaagactgcggcaaccaa
gccaagaaagattgcgtgcacatgcggtgcaggacgtgctgcaagagccgagggttcgac
tgcgcgacccacgtgaagagcacgtgggttccggcgtcgaaacgccgggagaggcagcag
cagcacctcacggcgctgcagcaacagcaacagcaacacactcaacaagaagttcaagtg
atccgcggaggcggagagaatccgaagaggctgagagagaatagtaacaacaatccgaat
aatccgagctccaattcttctctgggcgcctgcactcgcattatcacaaacacgtcaggg
ttggaagtggggaattttccagcagaagtgacttctcccgcagtgtttcgctgcgtgaga
gtaagctccatcgacgatgacgaagatcagtacgcatatcagacggctgtgaacatcgcc
ggccacgtgttcaagggaattctctacaaccaaggccccgatactaactataatatgagt
acagctggtgagagctcgtctggtggtggaggaggcggaggcggaggcggaggtggtgga
ggagtcattcaaccccttaatctcatcaatgcggcgcccacgacagttggcagtggcggt
gtaacagtggcagccgcttcaggttctgggacgttaatggatcctaattctctatacccg
gttaacccattcatggcttcgggagatcatagctggaatttgcgcttgagatctgcactt
ccacaaacaccaacatgcgaacagttttga
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