KEGG   Rosa chinensis (China rose): 112185723
Entry
112185723         CDS       T06020                                 
Name
(RefSeq) uncharacterized protein LOC112185723 isoform X1
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112185723
Enzymes [BR:rcn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112185723
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112185723
SSDB
Motif
Pfam: zf-RING_2 zf-RING_5 zf_RING_Vps8 zf-RING_UBOX zf-C3HC4 ADIP zf-C3HC4_2 CENP-F_leu_zip zf-rbx1 ZapB BLOC1_2 zf-ANAPC11 zf_RING_Vps8_fungal UPF0242 zf-RING_Vps41 AKNA Crescentin XhlA
Other DBs
NCBI-GeneID: 112185723
NCBI-ProteinID: XP_024179784
LinkDB
Position
2:23313124..23316996
AA seq 518 aa
MVNCDHHQDSSFSKAICSICHKDLEPFLEDLQAIFICGHVFHEFCLQESFGFFESVKRYS
CPVCKQRCKPNDVARLYFESVGISPEPPSLTRSPIGEDSEALRREVKELKEELYLCKEQA
KKEVANLKNEALKQQASIRQTLHLKTEALDKLTVECLRLQERNRALTKELAAFKLASDLD
LDEKEILNLAALGNGGNNENTIDVLRKSLIMSNRNRKELIAQHILLERGEALHRKKLEKA
KGKINRLNTKVQELTDQCNLLERGEARCSRKLEKAKGKINKLKTKVQKLKDQCNLLEQGE
ARYSRKIAKAKGKINTLKARVQEFDGAVEVRKETSVLGPSDLFESMVPVSGTSNDTAKAP
ADDIADVLILDDVKQVQSMLNITKESPITQPLARPDAVILDDLNQVQPMLNSSKESPITQ
PLPRPVSAYFSGGLIGPDGTKRFLGKWCKRSLNNQLVTNKYSSTDAGCSIVVVSDEEDIT
ENTPQTKRCKYEDKSKIVQSQGCLQYNTSLEGSVTTRV
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggtcaattgcgaccaccaccaggactctagcttcagcaaagccatctgctcaatctgc
cacaaagacctcgagcccttcctcgaggacctccaagccatcttcatctgcggccacgtc
ttccacgagttctgcttgcaagagtccttcggcttctttgagagcgtcaagaggtacagc
tgtccggtgtgcaaacagcgatgcaagccgaacgacgtcgctcggctctatttcgagtcg
gtgggcatctcgccggagccgccgagtttgactcggtcgccgattggggaagattccgag
gcattgcgtcgtgaggtcaaagagcttaaagaggagctttatttatgcaaggagcaagcg
aagaaagaagtggctaatttaaagaatgaagctctgaaacaacaagcatctatacgacag
acgcttcatttgaaaactgaggcgcttgataaattgactgtggagtgcttgcggctgcaa
gaaagaaatagggcactgaccaaagagcttgcagctttcaaattggcatctgatctagat
ctcgatgaaaaggagattttgaaccttgccgcacttggtaatgggggaaacaatgaaaac
acaatagatgttcttagaaaatctttgattatgagtaataggaatcgcaaagaactgatt
gcccagcatattcttcttgaacgaggagaggctcttcaccgtaaaaaactagagaaggct
aaaggaaagataaatagattgaatacaaaggtacaggaattgacagaccagtgcaatctt
cttgaacgaggtgaggctcgttgtagtagaaagctagagaaggctaaaggaaagataaac
aaattgaagacaaaggtacagaaactgaaggaccaatgcaatcttcttgaacaaggtgag
gctcgttacagtagaaagatagcgaaggctaaagggaagataaatacattgaaggcaagg
gtacaagaatttgatggtgctgttgaagtaaggaaagaaacttcagtccttggaccaagc
gatctgtttgagagtatggttcctgtgagtggtacctctaatgatactgccaaagctcct
gctgatgatattgcagatgttctgatccttgacgatgttaaacaggtacaatccatgctt
aacattacaaaggaatctccaatcacccagccacttgccagaccagatgctgtgattctt
gatgatctcaaccaagttcaacccatgcttaatagtagcaaggaatctccgattactcaa
ccacttcccagaccggtgagtgcatatttctctggtggcttgattggtcctgatggaacg
aaaaggtttttaggtaaatggtgcaagcggagcttgaacaatcaattggtaacaaacaaa
tattcaagtacagatgctggctgttcgattgttgtagtatctgatgaagaggatattacc
gaaaatacaccgcagacaaagaggtgcaagtatgaagataagtcaaaaattgtacagtcc
caagggtgcttgcagtacaacacttctttggaagggtcggtaactacgagggtttag

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