Rosa chinensis (China rose): 112185994
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Entry
112185994 CDS
T06020
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112185994
Membrane trafficking [BR:
rcn04131
]
Protein recycling
Others
EARP complex
112185994
Endosome - Golgi transport
Tethering complex
GARP complex
112185994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG7
RINT1_TIP1
COG4_N
Vps54_N
MPH2
Motif
Other DBs
NCBI-GeneID:
112185994
NCBI-ProteinID:
XP_024180106
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All DBs
Position
2:71817073..71826563
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AA seq
821 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIHSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATRAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKQILKSHVFSD
FSSLGTGKESEESNLLQQLSEACLVVDALEASVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWKIFPSAWHVSYRLCIQFCKKTRKQLEDILNNQKEKPDV
GTLLMALQRTLEFEDELAEKFGGGTRGREVGNEIEEIGRGENTTQSASDIRKKYEKKLAA
HQGNATEEKDKELSVPGAGFNFRGIISSCFEPHLTVYTELEEKTLMENLEKLVQEETWDV
EEGSQNNVLSSSMQLFLIIKRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFIRLPKG
GTGIVAAATGMDGQIKTSDRDQRVICYIVNSAEYCTNTSGELAESVSKIIDPQFADGVDM
SEVQDEFSAVITRALVTLVHGLETKFDNEMAAMTRVPWGTLESVGDQSEYVNGINMILAS
SIPILGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKQISETGAQQMLLDTQAVKTILLD
IPSLGHQTSRAASYAKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPMEFQRILE
LKGLKKADQQSILEDFDKHGPGITQPSTPPPPVATPVPTAPTVSLIQIPTSGGFLAPRED
VLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagcgctctcgaatacatcaaccagatgttccccacagaggcatcgtta
tccggcgtcgagccgctaatgcagaagattcacagtgaaattcggcgcgttgatgctgga
attctagctgcggttcgccaacagagcaattcagggaccaaagccaaggaagatcttgct
gctgccacgcgagccgtggaggaactcatgtataagatccgggaaatcaaaacaaaggct
gagcagagtgagacaatggttcaggagatatgtcgtgacattaagaagctggattttgcg
aagaagcatataacaaccaccattactgctcttcatcgtctgaccatgctcgtctctgct
gttgaacagcttcaagtgatggcttccaaacgacaatataaagaggcggctgcacagttg
gaggctgtgaaccaattatgtagccattttgaagcctatagggatgttccaaaaatcaca
gagctcagggagaaatttaagaatatcaaacaaatattaaagtcacacgtgttttccgat
ttctcaagcttaggtactggaaaggagtcggaagaatctaatttactccagcagctatct
gaggcttgcttagttgttgatgcattagaggcatctgtgagggaagaattagtaaataac
ttttgcagtagggagcttacttcttatgagcaaatctttgaaggagctgaactagctaag
ttggataagactgaacgaagatatgcatggatcaagcgccgcatgagaacgaatgaagaa
atctggaaaatctttccttctgcatggcatgtttcttatcgactctgcattcagttctgc
aaaaaaacaaggaagcagctagaagatatccttaataatcagaaagaaaagccagatgtt
gggacattgctgatggcactacagcgaactcttgaatttgaggatgaattggcagaaaaa
tttggaggtggtactcgaggcagggaggttggaaatgagattgaagaaattggtagagga
gaaaacaccactcaaagtgcttcagatattcgaaagaaatatgaaaagaagcttgctgcc
catcaaggaaatgccacagaggaaaaggataaagagttatctgtgcctggagctgggttc
aacttccgtggaatcatctcatcttgcttcgagcctcacttgactgtttacacagaacta
gaagagaagacactaatggagaatttggaaaaacttgttcaggaggagacatgggatgtt
gaggagggaagtcagaataatgttttgtcaagtagcatgcagttgtttcttataatcaag
aggagcttaaaacggtgcagtgctttaacaaagaatcagacattatttaacttgttcaag
gtgtttcaaaggattctcaaagcatatgcaacaaagctttttataagattacctaaaggc
ggtacaggaattgttgcagcagcaactggtatggatggacagataaagacatcagacaga
gatcagagggtgatttgttacattgtcaattcagcggaatattgcaccaacacgtctggt
gaactcgctgagagtgtgtccaaaataattgatcctcaattcgcagatggggtggatatg
tcggaagtgcaggatgaattttcagcagttataacaagagcattggtaaccttggtgcat
ggcctagaaaccaagtttgacaatgaaatggctgcaatgacacgagttccatggggtaca
cttgaaagtgttggtgaccaatcagagtatgttaatggcataaatatgatccttgctagt
agtatacctatacttggaagccttctttcaccgatctacttccaattcttcttggacaag
ctggcatcatctcttggtccacgtttctatgctaacattttcaagtgcaagcaaatatca
gagactggagctcaacagatgctattggatactcaagctgtaaagactattcttttggat
atcccatcacttggtcaccagacgtcacgtgctgcaagctatgcgaaatttgtaagccgt
gagatgagcaaagctgaagcacttctaaaggtcatactgtccccaattgattctgtcgca
gatacatatcgtgcattgctaccagagggaacacctatggagtttcagcgaattctggag
ctcaagggtcttaaaaaggcagatcagcagagtatacttgaagacttcgacaagcatggg
ccaggaattactcaaccttctaccccaccaccaccagttgccacacctgttccaactgcc
ccgacagtctctctgatacaaattcccacttcaggtggattccttgcacccagagaagat
gttctaaccagagcagctgcacttggacgtggtgcagccacaacagggttcaagaggttt
ctagctttaacagaagctgcaaaggaccggaaagatgggcctttcaggaagctcttcaat
gcttga
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