Rosa chinensis (China rose): 112186068
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Entry
112186068 CDS
T06020
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00061
Fatty acid biosynthesis
rcn00071
Fatty acid degradation
rcn01100
Metabolic pathways
rcn01212
Fatty acid metabolism
rcn04146
Peroxisome
Module
rcn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112186068
00071 Fatty acid degradation
112186068
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112186068
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcn01004
]
112186068
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112186068
Enzymes [BR:
rcn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112186068
Lipid biosynthesis proteins [BR:
rcn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112186068
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
112186068
Exosomal proteins of breast cancer cells
112186068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
112186068
NCBI-ProteinID:
XP_024180194
LinkDB
All DBs
Position
2:72606064..72609687
Genome browser
AA seq
726 aa
AA seq
DB search
MEGFEGLVVNSPTQHKSGARDLFSILTGFVVSAVVIGVVVPRFLPSMPFLGKKSKQRGVP
VEVGGEEGYAIRNAQASELIESPHRDATTVAALFEQTCNKHSQNRFLGTRKFIGREFVKA
GDGSKLEKLHLGDYEWQTYGQAFVRACNFASGLIKLGHEVDTRAAIFGDTRAEWFIAFQG
CFRQNITVVTIYSSLGEDALIHSLNETEVSTLICDSKQLTKMTSISSSLNTIKNVIYFED
EGISDANECGSYSNWTVTSFSEVEKLGQKNPAHPRLPSKNDIAAIMYTSGSTGLPKGVVI
THGNVVASTAAITIVLPRLYSTDVYIAYLPLAHVFELVAESVVMAAGCQIGYGSALTLTD
TSSKIKKGTKGDVSVLKPTLMATVPAIIDRIRDAVHNKVEEKGGIAKNLFNIGFKRRLAA
VEGSWFGAWGLERMFWDNIVFKNIRQVFGGRIRYSICSGAPLSTDSQRFINICMGAPVGQ
AYGITETFAAVTVSEKDDTTVGRVGPPLQSCYIKLVSWKDGGYLTSDKPMPRGEIVVGGP
SVTAGYFKNQEKTDEVYKVDEKGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYIS
LGKIEAALISSNYVEKIMAFADPYHSYCIALVVPLRQELEKWAQEAGINYNDFSELCGKN
EAVSEVQQSLYKVAKAEKLDKYEIPRKIYLAPDPWTPESGLVTAALKIRREQIKSKFKSE
IEKLYA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagggttttgaggggctcgttgtgaactcgccaacgcaacataaatcgggtgctaga
gatctgttctcaattctgacaggctttgttgtgagcgctgttgtgattggcgttgttgtg
cctcgcttcctgcccagtatgccgttcttgggaaagaaaagcaagcaaagaggagttcct
gtggaagttggtggggaggaaggttacgcaatacgcaatgctcaagcatctgagttaatc
gagtctcctcatagagatgccacaaccgtcgcagccttgtttgagcaaacttgtaacaag
cattcgcagaatcgatttcttggaactaggaagtttattggaagggagtttgtcaaagct
ggtgatggcagcaaattagagaaacttcacttgggagattatgaatggcagacttatgga
caagcctttgttcgtgcttgcaactttgcatcggggcttatcaaactaggtcatgaggtg
gatacccgtgctgcaatttttggtgacacccgggcggagtggtttatagcctttcaggga
tgcttccgccagaatattactgttgttactatttattcttccctaggtgaggatgccctg
attcactcgcttaatgagactgaagtatcaacattgatctgtgattccaagcagctgaca
aagatgacttccataagctcaagcctaaataccattaaaaatgttatttattttgaagat
gaaggaatttcagatgctaatgaatgtggaagttacagcaattggacagttacatccttt
tctgaagttgagaagcttggacaaaaaaaccctgctcatccaagattaccttctaagaat
gacattgctgctatcatgtacacgagtggcagtacaggtctaccaaagggagtcgttata
actcatggcaatgtcgtagcctctactgcagctattacgatagtgcttccaagactgtac
agcactgatgtatacattgcatacttgcccttagctcatgttttcgaactggtcgctgag
tctgtggtgatggctgcaggttgtcaaattggttatggttcagcattgactttaacagac
acttcaagtaaaattaagaaaggaaccaagggagatgtttctgtgttaaaaccgactctc
atggcaacagttcctgctattatagatcgtattcgagatgcagttcataataaggttgag
gagaaagggggcatagcaaagaatcttttcaatattgggtttaaacggcgactggctgct
gtagaaggaagctggtttggtgcttggggtctggaaagaatgttttgggataatattgtt
ttcaaaaacatacgtcaagtattcggagggcgcattcggtacagcatctgtagtggagct
cctctatcaactgattcacaacgattcatcaatatctgcatgggtgctccagtcggccaa
gcatatggcattacagaaacatttgctgcagttacagtgtccgagaaagatgacactaca
gtgggacgtgttggcccgcccctgcaatcttgctacattaagcttgtttcttggaaagat
ggtggatacttgacatctgacaagccaatgcctcgcggcgagattgtagttggcggaccc
tctgtaactgctggctactttaaaaatcaagagaagactgatgaggtttacaaggtagac
gaaaaaggcatgcgttggttttatactggtgacattggaaggtttcatcctgatggatgc
cttgaaattatagataggaagaaggatattgttaaactccagcatggagagtacatctcc
ctcggaaagattgaggcagcattgataagcagtaattatgtggaaaaaattatggcattt
gcagatccctaccacagttactgcatagctctagttgtccctctgcgtcaagaactcgag
aagtgggctcaggaagctggaataaattacaatgatttttcagagctgtgtggaaaaaat
gaagcagttagtgaggttcagcaatccctctacaaggtggcgaaagcagaaaaattggac
aagtatgaaattcctagaaagatttatttggcacctgatccatggacacccgaatccgga
ttggttactgctgctctcaagatcaggagggaacagatcaagtccaagttcaaaagtgag
atcgagaagttgtatgcgtga
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