Rosa chinensis (China rose): 112186082
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Entry
112186082 CDS
T06020
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00061
Fatty acid biosynthesis
rcn00071
Fatty acid degradation
rcn01100
Metabolic pathways
rcn01212
Fatty acid metabolism
rcn04146
Peroxisome
Module
rcn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112186082
00071 Fatty acid degradation
112186082
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112186082
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcn01004
]
112186082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112186082
Enzymes [BR:
rcn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112186082
Lipid biosynthesis proteins [BR:
rcn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112186082
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
112186082
Exosomal proteins of breast cancer cells
112186082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6032
Motif
Other DBs
NCBI-GeneID:
112186082
NCBI-ProteinID:
XP_024180212
LinkDB
All DBs
Position
2:72560872..72565427
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AA seq
729 aa
AA seq
DB search
MEDSEGSVLNSPVEENLGASDHLSILKGYGAFGILGAVIIALLVPLLLSTVFLGKKRKQR
GVPVQVGGEEGYAMRNIRVTDLIETPHKEATTVPALFEQSCEKYAQNQFLGTRKLIGREF
VTASNGKKFEKLHLGDYEWQTYRQVFDRACNFASGLIKLGHNVDTRAAIFADTCAEWFIT
FQGCFRQNITVVTIYSSLGEDALIHSLNETQVSTLICDSKQLKKLASISSRLNSIKNVIY
FEDEGSSDAKEFESTTNWTVRSISEVEKLGQENSVHPRLPSKNDIAVIMYTSGSTGLPKG
VMITHGNIVATTAAVTTLIPSLGGTDAYLAYLPLAHVFELAAESVMMASGVKVGYGSALT
LTDTSNKIKKGTKGDVSMLKPTLMTTVPAIIDRIRDAVFKKVEEKGGTAKNLFDIGFKRR
LAAVEGSWFGAWGLEKLFWDNFVFKVIRLGLGGRIRFMICGGAPLSADSQRFINICMGAP
IGQAYGLTETFAGATFSEWDDTAVGRVGPPLPSCYIKLVSWKEGGYLASDKPMPRGEIVI
GGPCVTAGYFKNQEKTDEVYKVDENGMRWFYTGDIGMFHPDGCLEIIDRKKDIVKLQHGE
YISLGKVEAALINSNYVDNIMVFADPFHNYCVAVVVPVRQALEQWAQGAGIKYNDFSELC
GKAEAVSEVQQSLSKVAKEAKLDKFELPGKIYLAPDPWTPESGLVTAALKIKREQIKSKF
KSEIEKLYG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctgaagggagcgtgttgaactcaccggttgaagaaaacttgggtgctagt
gatcacttgtcaattctgaaaggctatggagcatttgggatattgggtgctgttattatt
gccctacttgtacctttgttgctatcaactgtgttcctgggaaagaaaaggaagcaacga
ggagttcccgtgcaagttggtggtgaggaaggttatgcaatgcgcaacattcgtgttact
gacttgattgaaactcctcataaagaggcgacaactgtgccagccttgtttgagcaatct
tgtgaaaagtacgcacagaatcagtttcttggaaccaggaagttgattggaagggaattt
gtcacagctagcaatggcaagaagtttgagaaacttcacttaggagattatgaatggcaa
acttacagacaagtctttgatcgtgcttgcaactttgcatctggccttattaagttaggt
cataatgtggatacccgtgctgcaatttttgctgacacctgcgcagagtggtttataacc
tttcaggggtgcttccggcagaatattactgttgttacgatctattcttccctaggtgag
gatgcactaatccactcgcttaatgagactcaagtttcaacattgatctgtgattcaaag
cagttgaaaaagctggcttccataagctcaaggctaaatagcataaaaaatgtaatttat
tttgaagacgagggaagttcagatgctaaagaatttgaaagtactaccaattggacggtc
agatccatttctgaagttgagaaacttggacaagaaaattctgttcatccacgtttacct
tctaagaatgacatcgctgttatcatgtatacgagcggcagtacaggtctaccaaagggg
gtcatgataactcatggcaatattgtagccactacggcagctgttacgacactgattcca
agtctgggtggcactgatgcatacttagcatacttgcccttggctcatgtttttgaattg
gccgcggagtctgtgatgatggcttcaggtgttaaagttggttatggttcagcattgact
ttaacagacacttcaaataaaattaagaaaggaaccaagggagatgtttctatgttaaag
ccgactctcatgactacagttcctgctattatagatcgtattcgtgatgcagtttttaaa
aaggttgaggagaaaggggggacagcgaagaacctttttgacattggatttaaacggcga
ctggctgctgttgaaggaagctggtttggtgcttggggtctggaaaaattgttttgggat
aattttgtctttaaagttatacgtctagggctgggagggcgcattcgctttatgatctgt
ggtggagctcctttatctgctgattcacaacgattcatcaatatctgcatgggtgctcca
atcgggcaagcatatggcttgacagaaacatttgctggagctacgttttctgagtgggat
gacacagcagtgggccgtgttggcccaccattgcctagttgctacattaagcttgtttct
tggaaagaaggtggatacttggcatctgacaagccaatgcctcgtggggagattgtaatt
gggggaccctgtgtaactgctgggtactttaagaatcaagaaaagactgacgaggtctac
aaggttgatgagaatggcatgcgctggttttatactggtgacattggaatgtttcatcct
gatggatgccttgaaattatagataggaagaaggatatcgttaaactccagcatggagaa
tacatctcccttggaaaggttgaggcagcattgataaacagtaattatgtggacaatatc
atggtatttgcagaccccttccacaactactgcgtagctgtagttgtccctgtgcgtcaa
gccctggagcagtgggctcagggagctggaatcaagtacaatgatttttctgagctgtgt
ggaaaagctgaagcagttagtgaggtccagcaatccctctccaaggtagcaaaagaagca
aaattggacaagtttgaacttcctggaaagatttatttggcgcctgatccatggacacct
gaatccggattggttactgctgctctcaagatcaagagggaacagatcaagtccaagttc
aaaagtgagattgagaagttgtatggctga
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