Rosa chinensis (China rose): 112186128
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Entry
112186128 CDS
T06020
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112186128
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112186128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
N1221
CemA
Motif
Other DBs
NCBI-GeneID:
112186128
NCBI-ProteinID:
XP_024180252
LinkDB
All DBs
Position
2:54611595..54627863
Genome browser
AA seq
2667 aa
AA seq
DB search
MATSSQAQAVKSLNKSAGRRRFVFKSVSERLEEVEIDVFRSLDKLKDEPSPGSTFFRDCL
VEWRELNTAEDFISFHEQMTPLVQTLPLILLHKETIFEALVSRLQISARLSLEPILRLIA
ALSRDLLEDFIPFLPRIVDSLVSLLDSGADREPEIVEQIFTSWSCIMRDLQKYLAHKLVD
MLEVTAKLRYYPKNYVQELMAQAMGFLLRTRTAPFEQLDKGVRKIMLDVVEESTPFRKYG
VSALLYYTMTGTSTRFHSRAKQVLLLLMDNSILGSATVIEALISALQRLCEDLDSKELNL
MFECFYQEIKGCVTNGGVLRLSRLLSLLVSTVQVKNGKAVSDYKQMLEIVGVLVRTYIIP
SGIQMGEEHLSEVVDKIFQLMLSILSGLHTYNDLSTISGCSLQWAPVFDLQKSSLLGFIQ
QLLQKDICIVDTFRVNILRVMNVLIETSEEDVIYLLVIFCERLQRGAQSFKLLDGSPELS
RIQCFLSGTVNKWVGVLKGVRNGDLASTSIHEADLALLWGIINCFPQIVDSKEGPSLLLD
LTDAIDQLLMIEDGNIAGFPKHTWQSLIGTSLNSYYKLTCGKNLEPETSRFLALGKRHKS
CSHVLVAVADFLDSLYGSAMDGDTQFTIYHPELSAYMAMDALKMFADNLCHSDRGIRAST
LRILCHFETLSCDEPVLKKMKTELSPTSHVDSKDFNVLQLLLSIESTPLSICTSRKVTLL
ISRIQMGLSAGKISEAYLPLVVNSMIGIFHNRFSHLWNPVSECLAVLISRSNGLVWENFL
NYFEQCQSLFQASIDHVGQGDTMLSNKSSDLVERFNLFATPTSDSTPTATVLSSLLQSLQ
KLPIIESKSHQILPLFLKFLGYNCENFVSVGSFNSNVCKGKEWKRVLKEWLNLLKLMYNL
KHSYQNQFLKEVLQNRLLDENDAEVQMKVLDCLLIWKDDSLLPYSQQLKNLVSFQNLREE
LTRWSLSRESNLIEEQHRAYLVPIVIRLLIPSVRKLKKHASQKHSRVNHRKAVLGFIAQL
DVEELPLFFALLIKPLQIISIGSEGAANWFWSSSNGSVEEFQTLNFLKYFTFSNITALSW
KKRSAFLHVIEDVLGVFDASRVGPFLDFIMGCVVRILGSGTLGLDVAKGKGSSSLTNYSD
ANLASLGYDGAVDNNVLISTAVGQLKDLRSLSLKIVSFVLNKYEDHDFSCEFWDLFFGSV
KPLIDGFKQEGFSGQKPSSLFSCFLAMSRSEKLVSLLCREQNLVPDILSILTVTSASEAI
VACVLNFVENLLILDDELGVEDNAGKRVILLYLEALVDNLHCLFKNNVAAKRKLLKHPGE
TEVRIFQILPKYISDALSAWKFVDILLPVLANGAQDSEFRFEAVQVICDIVPVLGSDVTN
NILNAVSPLLISTDLDKRLVICNLLDTLARADSSIQFVAKLVQDLNATSITEIDSVDYDR
VLNAYGKITVNMFNTIREDHALVILSHCVYDMSSDESTLRHRAYDSLLSFVEFSALVLGK
VLNNDSEMPDEMLASEDHCWTKVCIQRIISKFLLKHMANAMKSGTAVREEWVELLREMVL
KLPEVANLGSLKPLQDENLEIDFFKNILHIQKHRRARAMKRFKNFVTNSYMPEGITKKLF
VPFFFTILMEEEKGEHIKNMCIEVIASISSREWSSSYLLLMRCFNEISKNPLKQKLLLRL
ICSILHQFHFSETIDTASVNETQTCLHKTVLPKIQKLLSDSEKVSVNISLAALRVLKLLP
GDVMDSQLPSIIHRISNFLKNRLESIRDEARSALADCLKELGLEYLHFIVKVLRSTLKRG
FELHVLGYTLNFILSKFLVTPISGKLDYCLEDLLSIAQNDILGDVAEEKEVEKIASKMKE
TKKQKSFETLKLIAQSITFKSHALKLLSPVITQFEKHLTPKTKSKLESMLNHIAAGIECN
PTVDQTDLFIFVHGLIEDGIKEENGKGETSFITGGNGHRRRDVIGKVDSSGRIAGAKSVC
SHLISVFALGMLQKRIKNLKVRKNDVQILSMLDPFVILLGKCLNSKYEDVLSATLRCLTS
LVRLHLPAIEDQADSIKAVLFDIAHSWLNTGSSLMESCLRLLTVLLRGNKITLSSDHLHL
LIQLPVFVDIERDPSFVALSLLKAIVKRKLVVPEIYDLVTRVSELMVTSQVEPIRHKCSQ
ILSHFLNDYPLSEKRLQQHLDFLLSNLRYEHSSGRKTVLEMLHAVIVKNPRNVVDEQSQT
FFVHLVVCLANDRDNEVRLMAGAAIKRLTGCVSPRSLLSILEYSLSWYLGEKQQLWGAAA
QVLGLLVEVEVMKKRFHKHINSVLKVTKSILQSAIDAVTHDSPHETAIPFWKEAFYSLVM
LEKILNQFHDLCFDRDLEDIWEAICELLLHPHMWLRCISSRLIAFYFASVKESCSGDHEN
PFGTYYLIKPNKLFMIAAYICCQLKTQLIEDAANKLITQNLAFTVCGVHSLMGQTECADS
HQFWFNLEQHEQDRFLKAFELLEARKGKTTFLSLASGMCDTNDENPSKNIRCLLVSNLLK
KMGKIALQMEAVQMKIVFDCFEKILSEMSREDCLLYAYEMLQPLYKVCEGFSGTVIPENM
KQLAEEVSGRLRSKLGSQNYVQVYNDIRKQLKAKRDKRKQDEKRLAVVNPMQNAKRKLRI
AEKHRANKKRKMMTMKMGRWAHHSKSK
NT seq
8004 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcttcacaagctcaggccgtcaagtccctcaacaaatccgccggccgccgc
cgctttgtcttcaagagcgtctctgagagactagaagaagtcgaaatcgatgtcttccga
agcctcgataagctaaaggacgagccttccccaggctccacgtttttccgggactgcctc
gtagaatggagggaattgaataccgcagaggatttcatctcattccacgagcagatgacg
ccgttggtccagacattgcctttgatattgttgcacaaggagaccattttcgaagcattg
gtttctagattgcaaatcagtgcaaggttatcgcttgagcctattctcaggttgattgca
gctctgtcccgagatctcctggaggactttatccccttcttgccaaggattgtcgactct
ctagtgtctcttttagatagcggtgctgatagggagcctgagatcgtggagcagatcttt
acatcctggtcgtgcattatgagggatttgcagaaatatcttgcgcacaagcttgtagat
atgctagaggtgactgcaaagttaagatattatccaaagaattatgtccaagaattaatg
gcacaggcgatgggattcttgctgagaacgagaactgcaccttttgagcagcttgacaaa
ggtgtcagaaagatcatgcttgatgttgtggaggaatcaacacctttcagaaaatatgga
gtcagtgctttactatattataccatgacgggaacctcaacaaggttccattctagagcc
aagcaagtgttacttttattgatggacaactcaatacttggttcagccactgttattgaa
gccttaatttctgcgttacagagattgtgtgaggatttggactccaaggagttaaacttg
atgttcgaatgcttttatcaggaaataaagggctgtgtgactaatggaggtgtactgcgt
ttaagccgactgttgtcactgcttgtgtctaccgttcaggtgaagaatgggaaagcggtt
tctgattacaaacaaatgcttgaaattgtgggggtgcttgtgcggacatatatcataccc
tctggcattcagatgggagaggaacatttatctgaagtcgttgataagatttttcagtta
atgctcagcattcttagcggactgcacacttataatgatttgtcaaccatctctggctgt
tcgttgcaatgggctcctgtatttgatttacagaagtcaagcttgttggggtttattcaa
caattgctacaaaaggatatttgtatagtagataccttccgagttaacattttaagagtc
atgaatgttttaatagaaacttcagaagaagatgttatatatctgttagtcatcttctgt
gaaaggctgcaaaggggagcgcaaagctttaagttactagatggatctcctgaactgtcc
aggatccaatgttttctgagtggcacggtcaataaatgggttggggttttaaagggtgtt
cggaatggggatttagcatctacttcaattcatgaagctgacttggccctgctgtgggga
atcattaactgctttccgcaaatagtagactccaaagaaggtccatccttgttacttgat
ttgacagatgcaatcgatcaactcctgatgattgaagatgggaatattgcaggctttcct
aaacacacttggcaaagcctaattggcacttccttaaattcctattacaaattgacttgt
ggtaaaaatttggagccagaaacaagcagatttttagctcttggaaaaagacacaaatca
tgttcacatgtgttggttgctgttgctgattttttggactctttgtatgggtctgcgatg
gatggcgacacccagtttacaatatatcatccagaacttagtgcatatatggctatggat
gctttaaagatgtttgctgacaatttgtgccactcagacagagggattcgtgcttcaact
cttagaatattatgccactttgaaactttaagttgcgatgagccagttctgaaaaagatg
aaaactgaactttctcctacttctcatgtcgatagcaaagactttaatgttcttcagctt
cttctgtcaatcgagtcaactcctctttcaatttgtaccagcagaaaagttactctattg
atttctagaatacagatgggcctctctgctggaaaaatatctgaagcttatcttcccctt
gttgtaaatagcatgattggtatcttccataaccggtttagtcatctttggaatcctgta
tcagagtgccttgcagttctgataagccgaagtaatggacttgtatgggaaaattttctc
aactattttgagcaatgccagtccttatttcaagcatctattgatcatgttggccaaggt
gatactatgctgtccaacaagtcaagtgatctggttgaacgttttaatttgtttgctacc
ccaacatctgatagtacaccaacggcaacagttttgtcttccttgctccaatctttacaa
aaacttccaatcattgaatccaagtctcatcagattctgcctttatttctgaaatttttg
ggctataattgtgaaaattttgtaagtgtgggatctttcaattcaaatgtttgtaaaggg
aaagagtggaaacgtgtccttaaagaatggttgaacttgctgaaactgatgtacaacctt
aagcactcatatcagaatcagtttcttaaagaggttttgcaaaataggctcttggatgaa
aatgatgctgaagtacagatgaaggttctcgattgcctattaatctggaaagatgattcc
ctgctcccatatagtcagcaattgaaaaacttggtcagcttccaaaatttaagagaagaa
ttaacaagatggagtttgtccagagagtctaatctaattgaagaacaacacagagcttac
cttgtgcccattgttatccgtcttctgattcccagcgtccggaaattgaagaaacatgct
tctcagaagcactcaagagtaaatcatcgcaaggcagtgctcggtttcatagctcaactt
gatgttgaagagctacctcttttctttgcattgttgataaagcccttgcaaattatttcg
ataggaagtgaaggtgctgcaaactggttttggagctcatcaaatggttctgtggaagaa
tttcaaacattgaatttcttgaagtatttcacgtttagtaatattacagccttgtcttgg
aagaaaagaagtgcttttctacatgtgattgaagatgttcttggagtttttgatgcatca
cgtgttggtcccttccttgatttcataatgggatgtgttgttcggatattaggaagcggt
actttaggtcttgatgtggcaaaaggcaaaggatcttcttcccttactaattattctgat
gctaatcttgcttcccttggatatgatggggcagtggataataatgttttgatatctacg
gctgtggggcagttgaaggatttgagatctttatccttgaaaattgtgtcctttgttctg
aataagtacgaagatcacgactttagctgtgaattctgggatcttttcttcgggtcggtg
aagcccttaattgatggtttcaagcaggagggattcagtggccagaagcctagttcactc
ttctcttgctttcttgctatgtctagaagtgaaaaattagtatcactgctgtgtagggag
caaaaccttgtccctgatatactctcaattctaaccgtcacgtcagcatctgaagctatt
gtggcttgtgttctgaactttgttgagaacttgttgattcttgatgatgaattgggtgtt
gaagacaatgctggaaaaagagttatacttctgtaccttgaagcactagttgataacttg
cattgtctcttcaaaaataatgttgcagccaagaggaaattgcttaaacacccaggggag
acagaagtgaggatttttcaaatattaccaaagtatataagtgatgcattgtcagcctgg
aaattcgtggatatattgctccctgttttagcaaatggagctcaagattcagaatttcga
tttgaagctgtgcaagtcatttgtgatattgttccagtactagggagtgacgttacaaat
aatattttgaatgcagtatctccattacttatttctaccgatctagataagcgtttagtt
atctgtaatcttctggacacacttgccagagcagactcttccattcaatttgtggcaaaa
cttgtccaggacttgaatgcaacctctatcacggaaatagatagcgttgattatgataga
gtgctcaatgcttatggaaagatcacggttaatatgttcaataccattcgagaggatcat
gcattggtcatattgtctcactgtgtctatgacatgtcatctgacgaatcaaccttgagg
caccgagcttatgattcattgctttcatttgttgaattttctgccctcgtacttggcaaa
gtattgaacaatgactctgaaatgcctgacgagatgttagcctctgaggatcattgctgg
acaaaagtttgcattcagcgcataataagcaaatttcttttaaagcatatggctaatgct
atgaagagtgggacagctgttagagaggaatgggtcgagttacttagagaaatggtgtta
aaacttccagaagtggcaaaccttggttcactgaaacctcttcaggatgaaaatcttgaa
atagattttttcaagaatatccttcatatacagaaacataggagagcaagggcaatgaaa
cgctttaagaattttgtcacaaacagctatatgccagagggcatcacaaagaaactgttt
gttcccttcttcttcacgatcttgatggaggaagaaaaaggagagcatataaaaaatatg
tgcatagaggtgattgcttcaatttcaagcagggagtggagttcatcctacttgttgctg
atgagatgcttcaatgagatttccaaaaatcctctgaaacagaagcttcttttgcggcta
atttgctctatcttgcaccagttccacttttcagagacaattgatactgcctctgtaaat
gaaacacaaacatgccttcataaaactgtgcttcctaagatacaaaagttactcagcgat
tctgaaaaggtcagtgttaacatcagtcttgctgcactgagagtattaaagttgctacct
ggagatgtaatggactcgcagcttcctagcattattcatcgcatttcaaactttttgaag
aacagattagaaagcatccgtgatgaagctaggagtgctttggctgattgtttgaaggag
cttgggttggaatacttgcattttatagtcaaagttttgcgaagcactttaaaacgtgga
tttgagttgcatgtcttgggatatactctaaactttatcttatcaaagtttctcgttact
cctatcagcgggaaactggactactgtttggaagatctgctttctattgcacagaatgat
attcttggagatgttgctgaggaaaaagaggttgagaagattgcttccaaaatgaaagaa
acaaagaagcaaaagtcttttgaaactctaaaattgattgctcaaagcataacattcaaa
agccatgccttgaagcttctatcacctgttataactcaatttgagaaacatcttacacca
aaaacaaagtcaaaattggaaagtatgttgaatcacatagcagctggtattgagtgtaat
ccaactgttgatcagactgacctttttatatttgtacatggcctgattgaagatggaata
aaagaagaaaatggtaagggtgagacttcgttcattacggggggaaatggacatcgtcga
agggatgtgattggaaaagttgattcctcaggccgcattgcaggtgctaaatcagtgtgt
tcacatcttatttctgtgtttgctcttgggatgttgcagaaacgcataaagaatttgaaa
gtgagaaaaaatgatgtacaaatattgtcaatgttggatccttttgtcatactgttaggg
aagtgcttgaattccaagtatgaagatgtcttatctgcaacacttagatgcctaacttcg
ttggtcaggttgcatttacctgccattgaagatcaagcagatagtataaaagcagtgctc
tttgatattgctcatagttggttaaatactggcagttctctaatggagtcatgtctgagg
ctgttaactgtacttttgcggggcaacaaaattactctttcctccgatcatctacatcta
ttgattcagcttccagtgttcgttgatattgaaagggacccctcatttgttgctctttca
cttctgaaggcaattgttaaacgcaagctagttgttccggagatatatgatcttgttact
agagtctcagaattgatggtaacaagtcaagtagaaccaattcgtcacaaatgtagtcag
attctgtctcacttcttaaatgattatcctctttcagaaaaacgattgcaacaacatttg
gattttttgctgtctaatctgaggtatgagcactctagtggaagaaaaactgtgcttgaa
atgctccatgcagttatcgttaaaaatccacgaaatgttgtagatgagcaatcacagacg
ttttttgtccatttggtggtttgcttggctaatgatcgggataatgaagttcgtttgatg
gctggtgcggctataaaacgtctcactggttgtgtaagcccacgctcacttctctccatt
cttgagtacagtctatcttggtatttgggtgagaagcagcaactgtggggtgcagcagca
caggttttggggttgctggttgaagttgaagtcatgaagaaacgattccacaagcatatc
aacagtgtattaaaagtgactaaaagcatcttgcagtctgccatcgatgctgtcactcat
gattctcctcatgaaactgccattcctttctggaaagaggcattttattcattggttatg
ctggaaaaaattctgaatcagttccatgatttgtgttttgatagggatcttgaggatata
tgggaagcaatttgtgagttactcctgcatccacacatgtggttacgttgtatttcaagt
cgtcttatagccttctactttgcttccgtaaaagagtcttgctcaggagatcatgaaaat
ccatttggcacttactaccttataaaacctaataaacttttcatgatagctgcatatatc
tgctgccaactgaagacacaactcattgaggatgcagccaacaaactgattacacaaaat
cttgcattcactgtgtgtggtgtgcactctttgatgggacaaacagagtgtgcagattct
catcagttttggtttaaccttgaacagcatgagcaagaccgatttcttaaagcttttgag
ttgctcgaagctagaaaaggaaagaccacgtttttatctcttgcctctggcatgtgtgac
acaaatgatgaaaatccctctaagaatattcgatgcttgcttgtctctaacttgctcaag
aaaatgggaaagattgcccttcaaatggaggctgtccagatgaaaattgtctttgattgt
ttcgaaaaaattttgtctgaaatgagtcgggaggattgcctgctttatgcttatgaaatg
ttgcagcccttgtataaagtttgcgaaggattttctgggactgtgatccctgaaaatatg
aagcaattagcagaagaagtttctggacgtctacgcagtaaactaggcagccaaaattac
gtacaagtttacaatgacatcaggaaacaactcaaggcaaaaagggataagaggaaacag
gatgaaaagcgcttggctgttgttaatcctatgcagaatgccaagaggaaactgaggatt
gcagagaagcatcgggccaacaagaaaaggaagatgatgacaatgaaaatggggagatgg
gcacatcattccaagtcaaagtga
DBGET
integrated database retrieval system
