Rosa chinensis (China rose): 112186155
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Entry
112186155 CDS
T06020
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic
KO
K02357
elongation factor Ts
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rcn03012
]
112186155
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112186155
Translation factors [BR:
rcn03012
]
Eukaryotic type
Elongation factors
112186155
Prokaryotic type
112186155
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
112186155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
112186155
NCBI-ProteinID:
XP_024180277
LinkDB
All DBs
Position
2:complement(4951253..4956981)
Genome browser
AA seq
1037 aa
AA seq
DB search
MTPVVPYSISNVSVFPGTAFSSRKTNSLTKFNFSRKSARHTLSPHSFLLPFSTSIRLFPL
YNNKCPVHHRSRTYVVSTTGTDVAVEQPDSPVAEASTEALDKSSDAAETSEKSSNSDASS
SPSQARRARTSRQSEMSPVKNEELVPGATFTGKVRSIQPFGAFIDFGAFTDGLVHVSQLS
DTYVKDVGSVVSVGQEVKVTLVEANMETKRISLTMREGKDASSSDRGGSDRRGGPKKGER
KNEGRKSSKFAKGQDLVGTVKNLVRAGAFISLPEGEEGFLPQSEEADEGFASIMGETSME
VGQEVNVRVLRISRGQVTLTMKKEEDIQKSESQITQGVIHTATNPFLLAFRQNKDIAAFL
DEREKVEKATKETVNPKSTEESTQKVNETENESNIHEVLDKQVSSDEQSLGVSSAVDESI
ENDGAPLEVVDVGASGIDDTSSKEDQETIVSSSTETPETIDGAVQDVQKEEMSSEILVPE
ESISATDSTIQESPSTDGVENDSNPDSCSEIANQALPSDITATEEVLESKVDDTVAKDPP
QIEPPTSESESPSAPLTEDEEVQPAPNTSGSITSSDVQPDLASPQETKATISPALVKQLR
EDSGAGMMDCKKALLESGGDIVKAQEFLRKKGLASADKKASRATAEGRIGSYIHDSRIGI
LLEVNCETDFVSRGNIFKELVDDLAMQAAACPQVQYVTTEDVPEEFINKEREIEMQKEDL
LSKPEQIRSKIVDGRIRKRLEELALLEQPYIKNDKVVVKDWVKQTIATIGENIKVKRFVR
FNLGEGLEKRSQDFAAEVAAQTAAKKVPTAGKEQPAAVEAKETVQKAPTVAISAALVKQL
REETGAGMMDCKKALSETGGDIEKAQEYLRKKGLSSAEKKSSRLAAEGRIGSYIHDARIG
VLIEVNSETDFVGRSEKFKELVDDLAMQVAACPQVQFVSVEDIPESTVKKEKELEMQRED
LLSKPENIRERIVEGRISKRLGELALLEQPFIKDDSILVKDLVKQTIAALGENIKVRRFV
RFTLGETVEGAKSEVEA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgtagttccatattctataagcaatgtctcagtatttcctggaactgccttt
tcctcaagaaagaccaattctttaaccaaattcaatttttctaggaaatccgctagacat
actctatccccccacagttttcttttacctttttcgacctctattagattgtttccatta
tacaacaacaaatgccctgtacatcatagatctagaacctatgtagtatctaccacaggg
actgatgtagcagtggagcaaccagactcacccgttgcagaagcttcaactgaagctttg
gataaatcctccgatgcagctgaaactagtgaaaaatcctccaactctgacgcaagttcc
agtccatctcaggcaaggcgtgcaagaactagtaggcaaagtgagatgtcacctgttaag
aatgaggagctggttcctggcgcaacttttacagggaaagtgagatcaatccagccattt
ggtgctttcattgattttggagctttcacagatggcctggtacatgtttcacagctgagt
gatacttatgtaaaagatgtaggaagtgttgtttctgttgggcaagaggtgaaggtgaca
ttagttgaagccaatatggagactaagcggatatctctcactatgcgtgaaggcaaagat
gcttccagtagtgataggggtggatctgataggagaggtggtccaaagaaaggagagagg
aaaaacgaggggagaaaaagttcaaagtttgctaaggggcaggacttagtgggcacggtg
aagaatttggtgagggctggtgcttttatatctcttcctgagggggaagaaggtttcttg
cctcagtcggaggaagctgatgaaggatttgcaagcattatgggggagacctctatggag
gttggccaggaagttaatgtccgtgtgttgcgtattagtagaggacaagtaaccttgaca
atgaagaaagaagaagatattcaaaagtcagagtcccagatcactcaaggagtcatccac
acagcaacaaacccatttctcctggcttttcgccaaaacaaggatattgctgcatttttg
gacgaaagagagaaagtagagaaagcaactaaagaaactgtaaatccaaagagtacagaa
gaatcaacacagaaggttaatgaaactgagaatgagtccaatattcatgaagtgctggac
aaacaagtaagcagtgatgagcaaagtcttggtgtctcttctgccgtggacgaaagtatt
gaaaatgatggtgctcctttagaggtggttgatgtgggagccagtggaatagatgatacg
tcaagcaaagaagaccaggaaaccatcgtttctagttcaacagaaactccagaaactata
gatggtgcagtccaagacgtacaaaaagaagagatgagttccgaaatcttggttcctgaa
gaaagtatatctgccacagattctacaattcaggagtctccgtcaactgatggtgtggaa
aatgattcaaatccagattcgtgtagtgaaatagctaatcaagcattgccatcagatatt
acagcaactgaagaggttctagagagtaaagtggacgacacagtagcaaaagatccacct
caaatagaaccacctacttcagagagtgaaagtccttcagctccactaactgaagatgag
gaagttcaaccagctcctaatacaagtgggagtatcaccagctcagatgtacaaccagat
cttgcttctcctcaagagacaaaagcaactatatcaccagctcttgtaaaacagctccgt
gaagactcaggagctggaatgatggactgcaaaaaggctttgttagagtctggaggagac
attgtcaaagcccaggagttccttagaaagaaaggcttagcaagtgcagacaagaaagcc
agcagagccactgctgaagggagaataggttcatacattcacgatagcaggattggtatc
ttgctggaggtaaactgtgagacagattttgtttcccggggtaacattttcaaggagctg
gttgatgatctggctatgcaagcagctgcatgccctcaagtacagtatgttactacagaa
gacgttcctgaagagtttataaacaaggaaagagagattgagatgcagaaagaagatctt
ttgtcaaagccagagcagattagatcaaagattgttgacgggaggatcaggaagaggctc
gaggagctggcattgcttgagcagccctacatcaagaatgataaggtggtggtgaaggac
tgggtgaagcaaaccattgcaaccattggggaaaacataaaagtcaagaggtttgtgcgt
ttcaatctgggagaaggcttggaaaaacggagtcaggattttgcagctgaagtggctgct
caaactgcagcaaaaaaggtgcccacagcagggaaagaacagcctgctgcagttgaagca
aaggaaacagttcagaaggcaccaactgtagctatctcagctgctttggttaaacaacta
agggaagaaactggagcgggaatgatggactgcaagaaagctctctcagaaactggaggg
gatatagagaaggcacaagagtacctcagaaagaaaggtctttcttctgctgaaaagaaa
tccagccggcttgctgctgaaggcaggataggatcttatattcatgacgctcgcattgga
gttctgattgaagtaaactccgagactgattttgttggtagaagtgaaaaattcaaggag
ttggttgatgacctggcaatgcaagttgcggcctgcccacaggtgcaatttgtatctgtc
gaagatattccagagagtactgtaaagaaggaaaaagagcttgagatgcagagggaggac
cttctgtcaaaacctgaaaacatcagggagagaatcgtggagggaaggatctcaaagagg
cttggggagcttgctttgttggagcaaccttttatcaaagatgatagtatattggtgaag
gatctggtgaagcagacgattgctgctcttggggaaaacataaaagttagaaggtttgtt
cggttcactcttggggagacagttgagggtgcgaaatcagaagttgaagcataa
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integrated database retrieval system
