Rosa chinensis (China rose): 112186171
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Entry
112186171 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit beta-1-like
KO
K17301
coatomer subunit beta
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112186171
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112186171
Membrane trafficking [BR:
rcn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112186171
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112186171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Motif
Other DBs
NCBI-GeneID:
112186171
NCBI-ProteinID:
XP_024180289
LinkDB
All DBs
Position
2:67792115..67797968
Genome browser
AA seq
943 aa
AA seq
DB search
MEKSCTLLVHFDKGTPALANEIKEALEGNDVEAKIEAMKKAIMILLNGDTIPQLFITIIR
YVLPSEDHTVQKLLLLYLEIIDKTDSRGKVLPEMILICQNLRNNLQSPNEYIRGVTLRFL
CRLNEAEIVEPLIPSILANLEHRHPFVRRNAVSAVMSVYRLPQGEQLLVDAPEIIDRFLA
SEQDPSSKRNAFLMLFNCAQDRAVSYLFTHVDRIIDWAEQLQMVVLELIRKVCRVNKGEK
GKYIKVIISLLNAQSSAVVYECANTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRINELKASHREILVELVMDVLRAVSSPNLDIRRKTLDIVLDLITPGNIDEVVMMLKKEV
VKTQGAELEKNGEYRQMLVQAIYSCAVKFPAVASTVVHPLMDFLGDTNLASAMDVAIFVR
EIIETNPKLRVSIITRLLDTFYQIRTSRVCTYALWIIGEYCLSLSEVESGIATIKQCLGE
LPFYTASEESEAQDVSKNSQVVNSSTVSSRRPVVLADGTYATQSAALETAMSAPVLVQGS
LASVGNLRSLILSGDFFLESVVACTLTKLVLRLDEVQPSKVEVNKATTQALLIMVSMLQL
GQSSVLPHPIDNDSQDRIVLCIRTLCNKDEEVKKIWLKSCRESCVKMLEDKKLREIEESR
AMAQISNAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKDGDDANKLNRILQ
LTGFSDPVYAEAYVTVNHYDIVLDVTXHLQNLFLELATMGDLKLVERPQNYTLAPESTKQ
IKANIKVSSTETGVIFGNIVYETSNVLERTVIVLNNIHIDIMDYISPSSCADVLFRTMWA
EFEWENKVAISTVIKDEKDFLNHIVKATNMKCLTPPSALEGECGVLAANLYAKSVFGEDA
LVNVSVEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcatgcacgctgctggtccacttcgacaagggcacgccggccctggccaac
gagatcaaggaagctctggaaggaaacgacgtggaagccaagatcgaagccatgaagaag
gcaatcatgatcttgctcaacggcgacacaattccccagctcttcatcaccattatccgc
tacgtcctcccctccgaggaccacaccgtccagaagcttctcctcctctacctcgagatc
attgacaagacagattcccgaggcaaggttctcccggagatgatcctcatctgccagaac
ctccgcaacaatctccagagccctaacgagtacatccgcggcgtcacgctccgattcctc
tgccggttgaacgaggccgagatcgtcgagccgttgattccgtcgattctggcgaatctg
gagcaccgccacccgttcgttcgacggaacgccgtcagcgcagtcatgtctgtgtatagg
cttccgcagggtgagcagttgctggtggatgcgccggagattatcgatcggttcttggcc
tccgagcaagacccgtccagtaagagaaacgctttccttatgctctttaattgcgcgcaa
gatagagctgttagttatctgtttactcatgtcgataggattattgattgggctgagcag
ctccagatggttgtgttggaattgattaggaaggtttgtagagtcaataagggtgagaag
gggaagtacattaaggtcattatatcattgcttaatgctcagtccagtgctgttgtttac
gagtgtgccaatacgctcgtgtccttgtcgtctgcccccactgcaattcgagctgcagcc
aatacttactgtcagttgttgttgtcgcagagcgacaacaatgtgaagttgattgtgctt
gataggattaatgagcttaaggcttcgcatagggagattttggttgagttggttatggat
gtgctcagggccgtgtcgagtccaaatcttgatattagaaggaagactcttgatattgtg
cttgacttgattactcctgggaatattgatgaggttgtgatgatgttgaagaaggaggtc
gtcaagactcagggtgctgagcttgagaagaacggggaatacaggcagatgctggtgcaa
gcaatatattcatgtgcagttaagtttcctgcggtggcgagcacggtggtccatccattg
atggatttcttgggggataccaatctggcctcagctatggatgtggctatttttgtgcgt
gagattattgaaaccaaccccaagttgcgtgtctctataattacaaggctgttggatact
ttctaccagatacggacttcaagggtgtgtacttatgctctttggattattggggagtac
tgtctctcactttctgaggttgagagtgggattgcaaccattaagcagtgtctaggggag
ctcccattttacaccgcttctgaggaaagcgaggcacaagatgtttcgaagaattctcag
gtggtaaactcatctactgtgtcttccaggagacctgtagtgcttgcagatgggacctat
gctacccagtctgctgcactggaaactgctatgtctgcacctgtccttgttcaaggatct
ttggcttctgtaggcaacttgagatcgttgattctctcaggtgactttttcctggagtct
gttgtggcttgcactttaacaaagcttgttttgagactagatgaggtccagccttctaaa
gttgaagttaacaaggcaaccacacaggctttgttgatcatggtgtccatgctgcaactg
ggtcaatcatcagtccttccacatccaattgataatgattctcaagacagaattgttctt
tgcatccgtacactatgcaataaagatgaagaagtgaagaagatatggttaaagtcttgt
agagagagttgtgttaaaatgcttgaagataagaagcttcgggaaatagaggaaagtaga
gctatggcgcagatatcaaatgcacaaccagatgaccttattgatttctaccatcttaag
agcagaaagggtatgagccagcttgagttggaagatgaggttcaagatgatctcaaacgt
gctactggagagtttgtaaaggatggagatgatgcaaataaactcaaccgcattcttcag
ctcacaggattcagcgatcctgtttatgctgaagcttatgttacagttaatcattatgac
attgttctcgatgttaccngacatcttcagaatttattcttggagttggccacgatgggc
gatctcaaacttgttgagcgtcctcagaactatacactagctccagaatcaaccaaacag
ataaaggcaaacattaaggtctcctcaactgaaacaggagttatatttggtaacattgtt
tatgagacgtcaaatgtgcttgagagaacagttattgttcttaataacatccatattgat
ataatggattacatctctccttcttcatgtgctgatgtgttgtttcggacaatgtgggct
gagtttgaatgggaaaataaggttgctataagtactgttatcaaagacgagaaggacttt
ctgaaccacattgttaaagcaactaacatgaagtgcctgactccaccatcggcactggaa
ggagagtgtggagtcctcgctgccaatctgtatgcaaagagtgttttcggggaggatgct
ttggtgaatgtgagtgttgagaaacaagcagatggtaagctaagtggatacatcagaatt
agaagcaagactcaaggtattgcactgagtcttggggacaagatcaccttgaaacagaag
ggtggcccttga
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