Rosa chinensis (China rose): 112186261
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Entry
112186261 CDS
T06020
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03082
ATP-dependent chromatin remodeling
rcn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112186261
03083 Polycomb repressive complex
112186261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112186261
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
112186261
Histone modification proteins
HAT complexes
HATB complex
112186261
HDAC complexes
Sin3A-HDAC complex
112186261
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112186261
PRC2.2
112186261
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
112186261
Heterochromatin formation proteins
Other heterochromatin formation proteins
112186261
Chromatin remodeling factors
NuRD complex
112186261
NuRF complex
112186261
NuRF complex (fruit fly)
112186261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
112186261
NCBI-ProteinID:
XP_024180384
LinkDB
All DBs
Position
2:complement(60876289..60882215)
Genome browser
AA seq
466 aa
AA seq
DB search
MKGKVTEPSVNDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLDQATYKNRQRLYLS
EQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELP
QNSKIVATHTDSPDVLIWDIEAQPNRHAVLGATNSRPDLLLTGHQDNAEFALAMCPSEPF
VLSGGKDKSVILWSIQDHISSLASDPGSARSPGSGGSNAKHASKVGGSNDKPTDSPSVEP
RGIYQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGNSPVVKVEKAHDADLHCVD
WNPHDVNLILTGSADKTVRMFDRRNLTSGGVGSPIHKFEGHNEAVLCVQWSPDKSSVFGS
SAEDGLLNIWDHEKIGKKQESVGSKLPNAPPAGLFFRHAGHRDKVVDFHWNTSDPWTVVS
VSDDCGSTGGGGTLQIWRMIDLIYRPEEEVLAELDKFKSHVLTCPA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaagttacggagccgtcggtgaacgaccgttacacgcagtggaagtcgctg
gtgcctgtgctctacgactggctcgccaaccacaatctcgtctggccttctctctcttgc
agatggggaccgcagctagaccaagctacttacaagaaccgtcagcgtctttatctttcc
gaacagaccgatggaagtgttccaaatacccttgtcattgcaaactgtgaagttgtcaaa
cctagggttgcagctgcagagcacatatcacagttcaatgaagaagcacgctctcctttt
gtaaagaagtataaaactataatacatcctggagaggtgaacagaatcagggaactccca
cagaatagtaagattgtggccacacacactgacagtcctgatgttctcatttgggacatt
gaggctcaacctaatcgtcatgctgtcctgggagctacaaattctcgcccagatctgcta
ttgactggacatcaagataatgctgaatttgcacttgctatgtgcccctcggaacccttt
gtactctctggagggaaggacaaatcagtgattttgtggagtattcaagatcatatctcg
tctttggcatcagatcctgggtctgcaaggtctccaggatctggtggttcaaatgctaaa
catgcctctaaggttggtgggagtaatgacaaacccacagacagcccttctgttgagcca
cgaggtatctatcaagggcatgaggatactgttgaagatgtacagttctgcccatctagt
gcgcaggagttctgcagtgtaggcgacgattcttgcctcatactatgggatgctagatct
ggcaatagtccagttgtcaaggttgagaaagctcatgatgctgaccttcattgtgtagat
tggaatcctcatgatgtcaatctcattcttacagggtctgcggataagactgttcgtatg
tttgaccgccggaatctcacttctggaggagttggatcacccattcataagtttgagggc
cacaacgaagctgttctctgtgttcagtggtctcctgacaagtcctctgtctttggaagt
tctgctgaggatggcctattgaacatctgggatcatgaaaagattggtaagaagcaagaa
tctgttggatcaaagctgccaaatgctcctcctgcaggattgtttttccgacatgctggt
catagggacaaggttgttgattttcattggaatacatctgatccctggacagtagtaagt
gtttctgatgattgtggaagtactggaggaggcggtacactccagatatggcgaatgatt
gatttgatttacaggcctgaggaagaggtgctggccgagcttgacaagttcaaatctcat
gtgttgacatgccctgcttga
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