| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6
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| KO |
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| Organism |
rcn Rosa chinensis (China rose)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rcn00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112186303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:rcn03019]
112186303
03012 Translation factors [BR:rcn03012]
112186303
Enzymes [BR:rcn01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112186303
Messenger RNA biogenesis [BR:rcn03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112186303
Translation factors [BR:rcn03012]
Eukaryotic type
Initiation factors
Initiation associated factors
112186303
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(69832770..69839772)
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| AA seq |
1234 aa
MVRTKKGGRPATLISEEARIRIRDILQQFLESNEEVYTFGTDLTVNERAYVHEQCSKMDM
KSKSSGSGKTRKVSVYRLFRMEAISNGKERIPQVTFSGDTREVLGDLFTWYPPGDGEEPK
ERIREDSDKFQKLHRKKDPLFCRPSMSQNEIAKKVEMQAAKMRKAKITKERSNLPMAPYR
DVVTSAVESHQVVLVSGETGCGKTTQVPQYLLDHMWGKGEACKIVCTQPRRISAISVAER
ISYERGQNVGEDIGYKIRLESKGGRHSSVVFCTNGILLRILISRGGGRSKTDASNKETKQ
QDLSDITHIIVDEIHERDRHSDFILAILRDMLPSHPHLHLILMSATVDVERFSQYFGGCP
IIRVPGFTYPVKSFYLEDVLSILRSVENNHLDNPALGASTADRDLSEEDKIALDEAISLA
WSDDEFDPLLELVSTEGTRKIFNYQHSVTGLTPLMVFAGRGRVGDVCMLLSFGADCQLRA
KDGTTALELAEQVNQLESAQMLKEHMESARSNSMEEQNLLNKYLQYFNPENIDFILIEQL
LGKIFSDSKDGAILVFLPGWDDINKMRDRLLTNPYFRDPSKCVIISLHSMVPAAEQKKVF
IRPPSGCRKIVLSTNIAETAVTIDDVVYVINTGRMKEKNYDPFSNVSTLQSSWVSKANAK
QRQGRAGRCQPGICYHLYSKLRAAALSDFQVPEIRRMPIEELCLQVKLLDPDCKIDEFLN
KTLDPPHSETIHNAISVLRDIGALSVDDKLTELGEKLGSLPVHPLTSKMLFFATLMNCLD
PALTLACAADYKDPFSLPMMPEEKEKAAAAKAELCSLYGGNSDQLAVIAAFDCWKIAKEQ
GKENRFCAKYFVSASTMQMLSGMRKQLQTELIRLGFIPEDVSRCSLNARNPGIIHAVLVA
GLYPMLGRLLSSTKSGKKKGSFVEIPDGSKVRLHPRSANFKIAFKARGGSPLVVYDEITR
GDGGSNIRNCTVVGPLPLLLLSTEIAVAPANDDEGSDVDDNEYESDEDAMKIDSKSGEQA
EEKIMSSPDKSVMVIVDGWLCFELKALDVAQIYCLRERLSAAILFTVTHPKEVLPPDLGA
SIYAIACVLSYDGLSGIPLPKPMDLPNSDLELEIGKDGKAQFKVTGNKAAKSKEPLRQRV
VCQRSLSRATDLPALNGFAKLCDDPSIQSVPPPAFANATDLPALINGVAKLSGDRSIHSA
PPPAFANTIPPPTSQVPAGPVAGNKRKKRRNQAG |
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| NT seq |
3705 nt +upstreamnt +downstreamnt
atggtgaggacgaagaaaggaggacgaccggccactctgatttcagaagaggcaaggatc
cgaatacgtgacatactccagcagttcctggagtccaatgaagaagtttacacatttggg
acagacctgacggttaatgaacgtgcttacgtccacgaacagtgcagcaagatggatatg
aaatccaagagctccgggtcgggtaaaacgcgcaaggtttcggtttacaggctttttagg
atggaggcaatcagcaatggtaaggaaagaatccctcaggtgacgttttccggggacaca
agagaagttttgggggatttgtttacgtggtacccacccggagatggagaggaacccaaa
gaaaggatccgtgaagatagtgacaagtttcagaaactccaccgcaagaaagacccgctg
ttctgcagaccttcgatgagccagaacgaaattgcaaagaaagtggaaatgcaggctgcc
aaaatgagaaaagccaagattactaaagagaggtctaacctacccatggcaccctacagg
gatgtggtaacgtcagcagttgaatctcaccaggttgttcttgtatctggcgagactggg
tgcggaaagaccacacaggtgccacaatatcttttggaccatatgtggggtaagggtgag
gcatgtaaaatagtgtgcactcaacccaggcgtatctcagccatatcagttgctgagaga
atctcttatgaaagaggacagaatgttggggaggatattgggtacaagatacggttggaa
agcaaaggtgggaggcactcatctgtggtgttctgcacaaatgggattctactgaggatt
ctaatttccagaggcggtggtaggtcaaaaacagatgcatcgaataaagaaaccaaacaa
caagatctctctgacataactcacattattgtggatgaaattcatgaaagggatcgccac
tctgatttcattctggctattctcagagacatgcttccttcgcatcctcatctgcatctg
atattgatgagtgcgactgttgatgtggaacggttttcacaatattttggtggctgccca
attatccgtgtcccagggttcacttatcctgtcaaatctttctatttggaggatgtattg
tctatcttgagatctgtagaaaataatcacttagataacccagcattaggtgcctcaact
gcagaccgtgacttatcagaggaagataagattgctttagatgaagcaattagtttggct
tggtcagatgatgaatttgatccacttctagaattggtttctactgaaggaacccgtaaa
atatttaattaccagcattctgtaactggacttacaccattaatggtatttgctggaagg
ggtagagtaggagatgtttgcatgctgctatcatttggtgcagactgccaattacgggcc
aaggatggaaccactgcattagagttggctgagcaggtaaaccaattagaatctgctcag
atgttgaaagagcatatggaaagtgctcgttctaactctatggaagaacaaaatttgctc
aataaatatctccaatattttaatcctgagaatattgatttcattcttattgagcaattg
ttagggaaaatttttagtgattcgaaagatggagctattcttgtttttcttccagggtgg
gatgatataaataaaatgagggacagattactcacgaacccatatttcagagatccttct
aagtgtgtgattatatctctacattcaatggttccagctgctgaacagaagaaggtcttc
attcgtccacctagtggttgccgaaaaattgttctttcaaccaatattgctgaaactgca
gtcactattgatgatgttgtttatgttataaacacgggtcggatgaaagaaaaaaattat
gatccttttagtaatgtttcaactcttcaatcttcttgggtgtcaaaagcgaatgccaag
cagcgacaggggcgtgcgggccgttgtcagcctggaatctgttatcatctttactctaaa
cttcgagcagctgcattgtcagattttcaggtgcctgagattaggagaatgccaatcgag
gaactttgccttcaggtgaagttgcttgatccggattgcaagatagacgagttcctaaac
aagacgctggatcctcctcattctgagaccatacacaatgcgatttctgttcttcgagat
atcggggctttgtcggtggacgataaacttacagaacttggggaaaagctaggttcttta
cctgttcatccattgacaagcaagatgctattctttgccacactgatgaactgtctcgac
ccagctttaactctggcctgtgctgccgactacaaggatccattctctcttcctatgatg
cctgaggaaaaggagaaagctgctgctgctaaggctgaactgtgttcattgtatggtggg
aacagtgatcagctagcagtcatagcagcatttgactgctggaagattgcaaaagaacag
ggtaaagagaatcggttctgtgctaaatactttgtctctgcaagtaccatgcagatgcta
tctggtatgcgaaagcaactccaaacagagctaattcggctggggtttattcctgaggat
gtgtctagatgtagcttgaatgcacgcaatccaggtataatccacgctgtccttgtggct
ggtctgtatcccatgttgggaagattgctttcttctactaagagtgggaaaaaaaaagga
tcctttgtagaaattcctgatggtagtaaagttcgtttgcaccctcgatctgctaatttt
aaaatagcattcaaggcacgtggtggctctcctttggttgtatatgatgagataacccgt
ggggatgggggttcgaatatacgaaactgtactgttgtcgggccacttccattactattg
ctgtcgacagaaatagctgttgctccagccaatgatgatgagggaagtgatgtcgatgat
aatgagtatgaaagtgatgaagatgcaatgaagatagattctaagtcgggtgaacaggcc
gaagagaagattatgtcatcacctgataaatctgtcatggttatagtggatgggtggctt
tgttttgagttgaaagctcttgacgttgctcagatctattgcttgagggaacgcctgtct
gcagcaattctatttacggttactcatccaaaggaagttttacctcccgatcttggggca
tctatttatgctatagcctgtgttctatcttatgatggtctatctgggattccattgcca
aagcctatggatttgccgaattcagatttagaacttgagatcggtaaagatggaaaggca
cagtttaaagtgacaggaaataaagcagcaaaatcaaaggagccattacgtcagagagta
gtttgtcagaggtctctatcgcgagctactgatttacctgccttaaatggatttgcaaag
ttgtgtgacgacccatcaattcagagcgttcccccaccggctttcgcgaacgctactgat
ttacctgccttaataaatggagttgcaaagttgagtggcgaccgatcaattcacagtgct
cccccaccagcttttgcgaacacaatcccgccgcccacttcacaagttccagcaggtcct
gtcgcaggaaacaagcggaagaagcgccggaatcaggctggttaa |
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