Rosa chinensis (China rose): 112186365
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Entry
112186365 CDS
T06020
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00500
Starch and sucrose metabolism
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112186365
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcn01003
]
112186365
Enzymes [BR:
rcn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
112186365
Glycosyltransferases [BR:
rcn01003
]
Polysaccharide
Storage polysaccharide
112186365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
CENP-F_leu_zip
eIF-4B
Motif
Other DBs
NCBI-GeneID:
112186365
NCBI-ProteinID:
XP_024180514
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All DBs
Position
2:complement(21031891..21038359)
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AA seq
679 aa
AA seq
DB search
MKAALISTAIPWQPPPHHKPLKPLCCSKVNGASSSPSPSPSSSSQINFRLQGSENAELPQ
PRIQSGEAKETDVWRLFREAQKNILHLNQHRLKAVEDLNKTNSEKQLLIDKIEQLEREKQ
ASVGKPQDRLSSCWEVLLRIDSMVLTRMIAAGEASDLRRLVTDHKMSLAEVFDGTLQKTD
AELLAELRHFFARSRRNGFHIVHICTEMAPLVSVGSLASYVTGLSRALQRKGHLVEVILP
KYSSLDLDEIQGLQEIEAESFSYFNGQLHGNRIWTGVVYGIGVTLIQPLEYSEFFNREKV
YGYSDDFERFTYFSRASLDYIVKCGKQPDVIHIHNWETAIIGPLFWDIFANQGLEGTRIL
LTCHDLNSQCLEHPDKLALCGLDPSSLHRPDRLQDNTKSHLVNILKGGVVYSNNVVIMSS
VLSKGRVIHTLSHGLDPTLNIHKNKLVVSPCGFDNSAWDPSKDSFLPRNFNVEDMEGKAV
CKAALQQHLGLSEHASTILIGCIVSEDVDLEKMRAVIMKACKSDVQFIIMGTSKLSSIHN
LGSLQETLKDEQVKFVNECDAAITHLVFAGSDIILCQSFHDPVLQVPLKALKYGAAPIAL
NSSHDNFRNFAEHDYETTNFSRFISSTFGNMSISEVLDEMKNHPSKWKRKILDAMEMDFS
WDAECCDVHCSAYTAIKKS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggcgttgatcagcaccgccattccttggcagcctccgccgcaccataagcct
ctgaaacccctttgttgctccaaggttaacggagcctcctcctcgccgtcgccgtcgccg
tcatcctcctcacaaatcaatttcaggttgcaaggcagcgaaaatgctgagctccctcag
cctcggattcagtctggggaagcgaaggagactgacgtttggcgactcttcagagaagct
caaaagaatattctgcatttgaaccagcatcggcttaaggccgtagaggatctgaacaaa
acaaacagtgagaagcagctgctgattgataagattgagcagttggagcgggaaaagcag
gcttctgttggaaagcctcaagataggctctcaagttgttgggaagtactccttcggata
gactcaatggtcctcactagaatgattgctgccggggaggcatctgatttgagaaggctg
gtcacggatcataaaatgagtctagctgaagtttttgatggcaccttgcagaagacagat
gccgagcttctagctgaactgagacacttctttgcaagaagcagaaggaatggctttcac
attgtgcacatatgtacggaaatggcaccactggtctctgttggatctttggcatcatat
gtgactggcttgtctcgtgcactacagaggaaggggcatttggtggaggtgatacttcca
aagtattcaagcctggacctagatgaaattcaagggctacaagagattgaggcagagtcc
ttttcatatttcaatggtcaacttcatggaaacagaatttggactggtgttgtctatggc
attggagttaccttaattcaacctctagagtattcagagtttttcaatcgtgaaaaggtg
tatggctactcagatgactttgaaaggtttacctatttctctcgtgcttcattagattat
attgtaaagtgtggaaagcaacctgatgtgatacatatccacaactgggagactgctatt
attgggccacttttctgggatatttttgctaaccagggacttgaaggtacgagaatctta
ttgacatgccatgacctgaattcacagtgcctcgagcatccggataaactagcgttatgc
ggacttgatccttcttcacttcaccgtcctgatcgcttgcaagataatactaagtcacat
ttggttaatattttgaagggtggagttgtttactccaataatgttgtcataatgtcctcc
gtactatcaaaaggcagggttatacatactctgagtcatgggttggaccctaccttaaac
attcacaagaacaagttggttgtttctccttgtgggtttgacaattccgcctgggatcca
tccaaggacagctttcttccccgaaatttcaatgtcgaagatatggaagggaaagcagtt
tgcaaagctgcattgcagcagcaccttgggttatcggagcatgcttctaccattcttatt
ggatgcattgtgtctgaagatgttgatctggagaagatgagggcagtaatcatgaaagct
tgcaagagcgatgtacagttcatcatcatgggtactagcaaattatcaagtatacacaat
cttggatcattgcaggaaacactgaaggatgaacaagtgaaattcgtaaatgagtgtgat
gcagcaataacacatttggtttttgccggatctgatattatcttgtgccaatcttttcat
gaccctgttctccaagttccattaaaggctttaaagtacggagctgctccaattgcatta
aactcctcccatgacaacttcaggaactttgcagaacatgactatgagactactaatttc
tcacgtttcatcagctctacctttggaaatatgtccataagcgaagtgctggatgagatg
aaaaaccacccctcgaagtggaagagaaaaatactggacgccatggaaatggacttctca
tgggatgctgagtgctgtgacgtccactgttctgcttacactgctataaagaagtcatga
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