KEGG   Rosa chinensis (China rose): 112186376
Entry
112186376         CDS       T06020                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112186376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112186376
Enzymes [BR:rcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     112186376
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     112186376
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 112186376
NCBI-ProteinID: XP_024180530
LinkDB
Position
2:complement(6073593..6080874)
AA seq 1202 aa
MGASPDANGDIGMSSKGKGFSNGDIEDMDIDDMDFEDDEVDDSTSIHDLGEVFLKDFCKE
ASVSFFKEYGLLSHQINSYNDFVKNGIQRVFDSFGEIVVEPGYDPSKKGDAEWRFASVKF
GKVTLNRPCFWGGSDKDKEYNMLPRHARLQNMTYSARMKVNITVQVYTQNLVKSDKFKTG
REQYLDKQTVSTDSRDIIIGRVPVMVKSDLCWMKEVEKGDCEFDQGGYFIIKGAEKTFIA
QEQSCLKRLLITNNQGLTVAYRSEVKRHRLIIRLSGISKLENVEGVEKVLSVYFMSTEIP
VWIWFFALGVSSDKEVIDLIDYGKEDASISNILFASIRDADERKDDFRRGKNALRFVELA
IKNTTFPPGESIEDCISMYLFPNLRGMKQKARFLGYMVKCLLQTFSGRRKCDNRDDFRNK
RLELAGELLERELKAHISHARRRMAKALQRDLCGDRVVRPVEHYLDASIVTSGVSRAFST
GAWCHPFKRMERISGVVANVGRANPLQTMIDMRKTRQQVQYTGKAGDARYPHPSHWGKVC
FLSTPDGENCGLVKNLATTALVSTNILEPIVRKLFRCGMEELVDDTSTSLDGKHKVFLNG
DWVGVCVDSHGFVTKLRTLRRGKMLPHEVEIKRDERQGEVRIFSDAGRILRPLLVVQNLK
KIRAAKGEKLTFKDFLDKGIIELIGPEEEEDCRTAWAIKYLFMEEQGNSVVKYTHCELDM
SFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGFSTTNPNLRVDTLSHNLHYPQRPLF
RTMISDSLGKPGYPVGHNGIMPKPEYFNGQNAIVAVNVHLGYNQEDSIVMNRASLERGMF
RSEHIRSYKAEVENKLSLEKRRKPDECVNFGKIQSKFGRVDSLDDDGFPCVGANLQNGDI
IIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSPSLGDKFSSMHG
QKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYAT
PFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGEMVRQLIFMGPTFYQRLIHMSEDKVKF
RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSLMNVCQK
CQNAANVIERKVTGGRKIRGPYCRVCDSADDIVRVNVPYGAKLLCQELFSMGISLKFETR
LC
NT seq 3609 nt   +upstreamnt  +downstreamnt
atgggagcgtcaccagatgccaacggagatataggtatgagtagcaagggaaagggcttt
tccaatggggatattgaggacatggatattgatgacatggattttgaggatgatgaagtt
gatgattcgactagcattcatgatctgggagaagtgtttctcaaggatttctgtaaggag
gcatcagtgtcattcttcaaggagtatggccttctcagtcaccagataaactcatacaat
gacttcgttaaaaatggcatacaaagggtctttgattctttcggtgagattgtagttgag
cctgggtatgacccatcaaagaagggagatgctgagtggcgatttgcatctgtcaaattt
gggaaggtcacccttaaccgaccctgtttttggggaggttctgacaaggataaggagtat
aatatgttacccagacatgctaggcttcagaacatgacatactcagccaggatgaaagtc
aatattacggtccaggtatatactcaaaatcttgtcaaaagtgacaagtttaaaactgga
agagagcaatatctggacaagcagactgtgagtactgatagcagggacatcataattggt
cgggttcctgtaatggtgaagtctgacttgtgttggatgaaggaagtcgagaaaggtgac
tgtgagtttgaccagggaggctactttataatcaagggtgcagagaagacgtttatcgct
caagaacagagctgtttgaagagacttctgattacaaataatcagggtctcacagtagca
tataggtcagaggtcaagcggcataggctcataattagattatccgggatttcgaaactt
gaaaatgttgaaggagtggagaaagtcctgtcagtatactttatgtcaacagaaatccct
gtttggatttggtttttcgcccttggggttagttcagacaaagaagttatcgatctcatt
gattatggcaaagaagatgcaagcatttcaaacatactgtttgcctcaattcgtgatgct
gatgagagaaaagatgactttcgtagggggaagaatgctttgaggtttgttgaattagcg
ataaagaatacgacgtttccacctggggaaagcattgaggactgcattagcatgtatctg
tttcctaatctgagaggcatgaagcagaaggctcggtttctagggtatatggtgaagtgt
cttttacagactttcagtggccgcaggaaatgcgataatagggatgactttagaaacaag
aggttggagttagcaggtgagcttctagaacgagagctgaaggcacatatttcacatgca
cggaggcgcatggcaaaggctctgcagagagatctatgtggtgatcgtgttgtccgcccg
gtggagcactatctagatgcatctatagttaccagtggtgtttccagagcattctctact
ggagcatggtgtcatcctttcaagaggatggagaggatatcaggtgtggtcgcaaatgtt
gggcgagcaaatccactgcagacaatgattgatatgaggaagacacgccagcaagttcaa
tacactggcaaggcaggagatgccagatatccgcatccttctcactggggtaaggtttgc
tttctctcaaccccagatggtgagaactgtggactcgtaaaaaatttggctaccactgct
cttgtaagtacaaacatattggagcccatagtgcgcaaattgttccgatgtggcatggag
gagttggtagatgatacttctacttcactggatgggaagcataaagtttttctgaatggt
gactgggttggcgtttgtgtagattcccatggttttgtcacgaaactaaggacattgcga
cgcgggaaaatgttgccacacgaggtggaaatcaaaagagatgaacgccaaggagaagtg
cgcatattttctgatgctggaaggattctacgtccgctcttggtagtccagaatttgaag
aagattagagcagcaaaaggagaaaaacttaccttcaaagattttcttgacaagggaata
attgagctcattggcccggaagaagaagaggattgccgtacagcatgggccattaagtat
ctgtttatggaagaacagggaaactcagttgtcaagtacacacactgtgagctggacatg
tcgtttttgttgggtttaagctgtggtatcattccctttgcaaatcatgatcatgcaagg
agggtgctgtaccagtctcagaagcactctcagcaggccattggtttttctactacaaat
cctaacctcagagtggatactttgtctcacaacttacactacccccagaggccgctcttt
cgtacaatgatatctgattcccttggaaaaccaggatacccggtgggacataacggtatc
atgccaaagcctgagtacttcaatggccagaatgcaattgttgcagtcaacgtgcacctc
ggatataaccaagaagattcaatagtaatgaaccgggcatcactagaacgtggtatgttc
cgatctgagcacataaggagttacaaagctgaagttgaaaacaagctctcattggaaaaa
agacgaaaaccagatgagtgtgtaaattttggcaaaatccagagtaaatttggacgtgtt
gacagccttgatgatgatggattcccctgtgttggtgcaaatctgcagaatggggatatt
attattgggaggtgcagtgaatctggtactgatcatagcatcaaattgaagcatactgaa
aggggaatggtgcagaaggttgtgctttcctctaatgacgatggcaagaattttgctgtt
gtatcgttaagacaggttcgttctccttctcttggagacaagttctcaagcatgcatggg
caaaagggtgtcctaggttttttggagtctcaagagaatttccctttcacaatacaaggg
atagttccagatattgtaattaatccacatgcgtttccttcaagacaaactcccggtcaa
ctcctagaggctgctttagggaaggggattgcctgtggtggttcaaagagatacgcgacc
cctttctctactctctctgttgatgacatcacagaccagcttcatagagctggattttca
agatggggaaatgagagagtatacaatggtcgaactggtgaaatggttcgccaactgata
ttcatgggcccaacattctatcaacgtctgattcacatgtctgaagacaaagtaaagttt
aggaacactgggccagttcaccctctcacccggcagccagtggcagacaggaagcgattt
ggtgggatcaaatttggtgagatggagcgcgactgtcttatagcccatggagcatcagca
aacttgcatgaacgcctcttcactctcagtgactcctccctgatgaacgtttgccagaaa
tgccagaatgcagccaatgtgatagagcggaaagtgactggtggccgcaaaatcaggggt
ccctattgccgggtctgcgactctgctgatgacattgtgagggtgaacgtgccatatggg
gccaagctattgtgccaggagctattcagcatgggcatcagtctcaagtttgaaaccagg
ctctgttga

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