Entry
Name
KO
Organism
rcn Rosa chinensis (China rose)
Pathway
Brite
KEGG Orthology (KO) [BR:rcn00001 ]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112186450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:rcn04121 ]
112186450
03400 DNA repair and recombination proteins [BR:rcn03400 ]
112186450
Ubiquitin system [BR:rcn04121 ]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
112186450
DNA repair and recombination proteins [BR:rcn03400 ]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
112186450
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
2:complement(83099314..83103326)
Genome browser
AA seq
733 aa AA seq DB search
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWTILEHAIREIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVRTMTYHLMEISKSIEAAQGELFLEELNRKWAEHNKALQMIRDILMYM
DRTFIPSTHKTPVHELGLNLWRDVVIHSSKTQSRLLDTLLELVLRERNGDVINRGLMRNI
IKMLMDLGSYVYQEDFEKHFLEVSADFYRCESQEFIESCDCGNYLKKAERRLNEEMERVS
HYLDAKSEAKITSVVEKEMIESHMNRLVHMESSGLVNMLVDDKYEDLGRMYNLFRRVQNG
LVIVRDVMTAYIRDTGKHLVTDPERLRDPVDFVQRLLDMKDKYDKIISLAFNNDKTFQNA
LNSSFEYFINLNARSPEFISLFVDDKLRKGLRGVSEEDVEVVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHGFYT
AVGPQLGDSPTLTVQVLTTGSWPTQPSVTCNLPAEIMWVCEKFKSYYLGTHTGRRLSWQT
NMGTADLKTTFGKGQKHELNVSTYQMCVLMLFNNADQLTYKEIEQATDIPATELKRCLQS
LACVKGKNVLRKEPMSKDIVEDDTFFFNDKFTSKFFKVKIGTVVAQRESEPENLETRQRV
EEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQARFLPNPVVIKKRIESLIEREFLE
RDKTDRKLYRYLA
NT seq
2202 nt NT seq +upstream nt +downstream nt
atgagtgctcagaagaagaggaacttccaaattgaggcgtttaagcatcgggtcgtggtt
gatccgaaatacgcagagaagacttggacgatcctggagcatgccatcagagaaatctat
aatcacaatgctagcgggctcagttttgaagagctttataggaatgcttacaatatggtg
ctgcacaaatttggagagaaactgtactctggtctggtgagaaccatgacttatcatctg
atggaaatatccaaatcgattgaagctgctcagggagagctgtttctggaagagcttaac
agaaaatgggcagagcataacaaggcgttgcagatgattcgagacatattgatgtacatg
gacagaacttttattccaagcacccacaaaacccctgttcatgagcttggtctgaacctt
tggagggatgtcgtcattcactccagcaaaacccagtctaggcttttggacacgcttctt
gagcttgtgcttcgagaaagaaatggtgacgtaatcaacagaggcttgatgcggaatatt
ataaaaatgttaatggatttaggttcttatgtttaccaagaagactttgagaagcatttt
cttgaagtttcagctgatttttaccgctgtgagtctcaagagttcatcgagtcatgtgat
tgtggaaactatttaaagaaggccgaaaggcggctaaatgaggagatggagagagtgtcc
cattacttagatgctaaaagtgaagctaagattaccagtgtggtggaaaaggagatgatt
gaaagtcacatgaacaggctagttcatatggaaagctcgggtttagttaatatgcttgta
gatgacaaatatgaagacttgggaagaatgtacaacttgtttcgcagagtgcagaatggg
cttgtaattgtaagagatgtcatgactgcttacatccgagatactggaaagcatctagtt
actgacccagaaaggttaagggatcctgtagactttgtgcaacgtctccttgatatgaag
gataagtacgacaaaatcatcagtttggcatttaacaatgacaagacattccagaatgct
ttaaactcttcttttgagtacttcattaatttgaatgcccggtcccctgaatttatttct
ctctttgtggatgacaagcttcggaaaggtcttagaggggttagcgaggaggatgtagag
gttgtactggacaaggtcatgatgcttttccgttaccttcaggagaaagatgtgtttgaa
aagtattacaagcaacacttggcaaagaggcttctttcaggcaaaactgtttctgacgat
gcagaaagaagtctgattgtaaagctcaaaacagaatgtggatatcaatttacttccaag
ttggagggtatgttcactgatatgaaaacctctcaagatacaatgcatgggttctacact
gcagttggtcctcagttaggtgatagcccaacactaacagtccaggtcctcaccacaggt
tcatggcccactcagccaagtgtgacatgcaaccttccagctgaaattatgtgggtatgt
gagaagttcaagagttattatctagggacccatactgggcggagattgtcctggcaaact
aatatgggaacagctgatttgaaaacaacttttggaaagggccagaagcatgagctgaat
gtttcgacgtatcagatgtgtgtgctgatgctattcaacaatgctgaccagttgacgtat
aaggaaatcgagcaggctacagatatcccagccactgaattgaagaggtgcctgcagtct
ctggcctgtgttaaggggaagaatgttcttcggaaggagccaatgagcaaggacatagtt
gaggatgatacctttttcttcaatgacaagttcacgagcaagttctttaaagtaaagata
ggtaccgtggttgcacaaagggagtctgaaccagaaaacctagaaacccggcagagagta
gaggaagacagaaagccccagattgaagcagcaattgtgaggatcatgaagtcaaggcgg
gtactggatcacaataatatagttgctgaggtcacaaagcagctgcaggcgcgattcttg
cccaatcctgtagtaataaagaagcgtattgagtccctcatcgagcgagagtttttggag
agggataaaacagatagaaaattgtacaggtaccttgcttga