KEGG   Rosa chinensis (China rose): 112186506
Entry
112186506         CDS       T06020                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03020  RNA polymerase
rcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112186506
  09124 Replication and repair
   03420 Nucleotide excision repair
    112186506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112186506
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112186506
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112186506
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112186506
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 112186506
NCBI-ProteinID: XP_024180723
LinkDB
Position
2:complement(29353443..29355418)
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQMSDDPRNQVSQVFEKSLQ
YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHD
DEAIDKMLNDLALIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtccggcgaagaggaagagaacgccgccgagctcaaaatcggggacgagtttctcaag
gccaagtgtttgatgaactgcgaagtttctctgattcttgagcacaagttcgagcagctt
cagcagatgtctgatgatcccaggaaccaagtctctcaagtgtttgagaagtcgctgcag
tatgtgaagcgctttagccgctataagaatcctgatgccgtgaagcaagtgagagaaatc
cttagtagatatcagttgactgagtttgagctttgtgtgcttggcaatctctgccctgaa
actgtcgaggaggctattgctatggtaccgtctataaaggcaaaaggaagggtgcatgat
gatgaggcaattgataaaatgttgaatgacctggcactaatcaagaaatttgagtag

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