Rosa chinensis (China rose): 112186566
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Entry
112186566 CDS
T06020
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112186566
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
112186566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
PHD_2
ArgoL1
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
112186566
NCBI-ProteinID:
XP_024180791
LinkDB
All DBs
Position
2:80879264..80891518
Genome browser
AA seq
1802 aa
AA seq
DB search
MSYPVSSSSGAGASHQGIRLSNTTHSEVAPCLPLPSLPVFCGASDQDLRLFDEPSRSSAR
LNYYDAAQASRIADLLRATDVSYLNLREDTAAVQYGYVQPMELHDEVLQYNPEAFQYTTP
GPIMGQVPGSSTVPDKKPFVPIIPITRTSERDYGATHNNQLNYTPPNDISIASSRKPKAK
RKASDGVTSSVGSDPVASQEATVGCFCELVEDFCGRAEIFSEDRDEAQWLSMPLSDLRML
ANEIMSLRAKRLLHMVPVDTFVRLLRILDHQIHGAEGLSINEQSDSNGVSSINCALESIH
AALAVMAHNQMPKQLYKEEIIERILEFSRHQIMDVMCACDPSYRALHRPSENGTLEVEED
EILDAETGSASKRRRSTKTVKVQKSSYNRVSAAVNNILQKMCTILGLLKDLLLIEKLSDS
CILQLLKTSFTTFMVDNIQLLQLKAIGLISGIYYSYTQHRTYVIDELLQLLWKLPFSKRA
LRSYHLPDEEQTQIQMITALLIQLVHCSANLPAPLRQDSSVNSILEVSDNADYPIKGLEA
AQAACCHFWKGVLQRFANVKNQEASEFKVMMENLVTDLLTTLNLPEYPASAPILEVLCVL
LLANAGVKSKDVAARSMAIDLLGTIAARLKRDSLLRSRSKFWILQELVSGDAADQTYPKD
VCSACLDGRVEKTFFVCQGCQRMFHADCMGVREHEVPNQSWHCQICLCRKQLLVLQSYCK
SQYKDDGFKDHKSSGRKTEVTFSITKLEIVQQLLLNYLQDTASADDVHLFIRWLYVCLWY
KDDPPKSQQKFIYYLARLNSKAIVRDSGTVFSLLTRDLIKQITLVLGRNTSFARGFDKIL
HLLLASLRENSPVIRAKALRAVSIVVEADPEVLGDKRVQPAVEGRFCDSAISVREAALEL
VGRHIASHPDVGLKYFEKVAERIKDTGVSVRKRSIKIIRDMCVSNGDFSEFTSACIAIIS
RIGDDESSIQDLVCKTFYEFWFEEHTGSHTQFFGDDSSVPLEVAKKTEQIVEMLRRMPTP
HHLVTVIKRNLALDFFPQAAKAAGINPVLLASVRNRCELMCKFLLERILQVEEMNIQEVE
MCALPYVQVLHAFCVVDPTLCAPVSNPSQFVVTLQPYLKSQDDNRVVAKLLESIIFIIDS
VLPLVRKLPQNVLEELEQDLKSMIVRHSFLSVVHACIKCLCAVSKVAGKGAAVVEYLIQV
FYKRLDAEEVDNQQKAGRSLFCLGMLIRYGNSLLCYSDQTIDVASSLGLFKRYLLMDDFF
LKARSLQALGFVLIARPEFMLEKDIGKILEETFSSSSDVRLKMQALQNMYDYLLDAETQL
GTDTTSNNVADYSVEGGNAVPVAAGAGDTNICGGIVQLYWDNILERCLDFNEQIRSSALK
IVEVVLRQGLVHPITCVPFLIALETDPLEANSTLAHHLLMNMNEKYPSFFESRLGDGLQM
SFGFIQSIRPSTERENTKPPSKASGNAKGKVDDVSFAQARLGVSRIYKLIRANRVSRNKF
MSSIVRKFDNPIWTTSVVPFLMYCTEILALLPFTTPDEPLYLVYAINRVIQVKAGQLEAK
LKALTLHLLQRGAPRGNGVIKEDPAAPPFTRGMASVDLNGTIEPESAYYMAAMDLNGTIE
QDPADQSVSNQDTVLEAKMHGKGSVSSSGISIDDVQIIQADCLAAIALQLLLKLKRHLKI
VYSLNDARCQAFSPTDPIKPGDAFSKQSIPFDVSDTHTNLPGTYQELVQRYQEFKNALKD
DTVDFSTYTANLKRKRPAPRKGRKSGVRDDEDDNDDDEDWSGGARRLSYSGRRGGHSRSR
QR
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgagctatccggtcagttcgagctccggcgccggtgccagtcaccaaggcatccggctc
tccaatactactcactccgaggtcgctccttgcttgcctttgccttctcttccagtgttc
tgcggcgcttccgatcaggacctccggttgttcgatgagccgagtcggagcagtgcgagg
ttgaattactacgacgccgctcaggccagtaggattgctgatctgcttcgagctactgac
gtctcgtacttgaacctgagggaggatactgcggcggttcaatatggctatgtccaacct
atggaacttcacgatgaagttttacagtacaatccagaagcctttcagtatactactcca
ggtcctattatggggcaagtgcctggcagtagtacagtaccagataagaagccctttgtg
ccaattatacctataacaagaacttctgaaagagattatggtgcaactcacaataatcag
ctcaactatactcccccaaatgacatatctatagcatcctccagaaaaccaaaagcaaag
agaaaagctagtgatggcgttacttcctcagttgggtcagatcccgttgcaagtcaagaa
gccactgttggatgcttctgtgagttggtggaggatttttgcggcagagctgaaattttc
agtgaggatcgggacgaagcacagtggttatctatgcctctttctgatcttagaatgctt
gcaaatgaaataatgtctcttcgcgcaaagaggcttctacatatggttcctgtagatact
tttgttagattgttaaggattttagatcatcagatacatggagctgaaggcttgtctata
aatgaacagtcagattcaaatggggtttcatcaatcaattgtgcactagagtccattcat
gcagctttagcagtaatggcccataaccagatgccaaagcagctgtataaagaagagatc
attgaaagaattctggagttctccaggcatcagataatggatgttatgtgtgcttgcgat
ccatcatatcgtgctttacataggccaagtgaaaatgggacacttgaagttgaggaagac
gaaattcttgatgctgaaactggttcagcaagcaagaggcggcgtagtactaagactgtt
aaagtgcagaaatcatcatataacagggtctctgctgctgtgaataatattcttcagaaa
atgtgcacaattcttggtttgctaaaggatttgttgctgatagaaaagttgtcagatagt
tgtatcttacaactactgaaaacaagctttactacatttatggtggataatatccagctt
ttgcaactgaaggcaattggtttgatcagtgggatatactattcatacactcaacatcgg
acttatgttatagatgagttacttcagctgctttggaagttgcctttctcgaagcgagct
ttgagatcctatcacctacctgatgaagagcaaacgcagattcaaatgatcactgctttg
ctgattcaattggttcactgtagtgcaaaccttcctgcacctttaaggcaggattcaagt
gttaattccatcttagaagtttctgacaatgctgattatccaattaaaggccttgaggca
gcacaagcagcatgttgtcacttttggaaaggggtacttcagcggtttgctaatgtcaag
aaccaggaagcttcagaattcaaagttatgatggagaatcttgttactgatctgctgaca
acattgaatttacctgaatatcccgcttcagcccctattctggaggttctttgtgtcttg
ttactcgcgaatgctggggtgaaatctaaagatgtagctgcacgtagcatggctatcgat
cttctaggaaccattgctgcgaggttgaagcgtgattctctccttcgcagtaggagcaaa
ttttggatattacaggagttggttagtggggatgcggctgatcagacttatccaaaagat
gtatgttctgcttgtttagatggcagggttgaaaagactttctttgtatgtcaaggttgt
cagagaatgtttcacgcagattgcatgggagtaagagagcatgaagttcctaaccaatct
tggcactgtcagatatgtctctgccggaaacaacttcttgttttacaatcttactgcaag
tcacaatacaaagatgatggatttaaggatcataaaagttcaggaagaaaaactgaagtt
actttttcaattactaaacttgagatcgtccaacagttgcttttgaattacctacaagat
accgcatcagctgatgatgttcatctctttattcgttggctttatgtctgcttgtggtac
aaggatgatccaccaaagtcccagcagaagttcatttactatcttgcaagactgaactca
aaagcaatagtgcgggattctgggactgttttttccttgctgacaagggacttaatcaag
cagattaccttagtattgggacgaaatacttcttttgccagaggatttgataagattcta
cacctgcttctggcaagtctaagggagaattctcctgtaatcagggccaaggctttacga
gcggttagtatagttgtagaggctgatccggaggttttaggagacaaacgtgtgcaacca
gctgttgaaggaaggttttgtgattccgcaatttctgttagagaagcagcactggaactc
gtagggaggcatattgcttcccatcctgatgttggtttgaagtattttgagaaggttgct
gagagaatcaaagatacgggtgtgagtgttcgaaagcgatctattaaaatcatacgagat
atgtgtgtttcaaatggggacttctctgaatttactagtgcttgcattgctatcatctcc
cgtattggtgacgacgaatcaagtatacaggatcttgtttgcaagacattttatgagttc
tggtttgaggaacatactggttcacatactcaattctttggagatgatagctctgttcca
ttggaggtggctaaaaaaactgaacagattgttgagatgttgaggaggatgccaacacca
caccatcttgttaccgtcattaaacgcaacttagcccttgattttttcccacaagcagct
aaagctgcgggaatcaatcccgtcttacttgcatcagtacgcaatcggtgtgagctaatg
tgcaagtttttactggaaaggatattgcaggtagaagaaatgaatatccaggaagttgag
atgtgtgcacttccatatgtgcaagttctgcatgcattttgtgttgtggatccaacatta
tgtgcaccggtttctaacccttcgcagtttgtggtcactcttcagccttatctaaagagt
caggatgataatcgagtggttgccaagttattggagagcataatattcataattgattct
gtcctgcctttagtaagaaagttgccacaaaatgttcttgaagaacttgaacaagactta
aagagcatgattgttcggcattccttcttgtcagttgttcatgcttgcatcaagtgcctc
tgtgctgtgagtaaagtggcaggaaaaggcgctgctgttgtggagtatctaattcaggtt
ttttacaaacggctggatgctgaggaagttgacaaccagcagaaagcggggcgatctctt
ttctgtcttggaatgcttatccgttatggcaactctttactgtgttactctgatcaaaca
attgatgttgcaagcagtctcggcttatttaaaagatatcttctaatggacgattttttc
ttaaaggctagatcattgcaggcattgggctttgtgttaattgctaggcctgaatttatg
ttggaaaaagatattgggaagatattagaggagacattctcttctagctctgatgttcgt
ctcaagatgcaagctttgcaaaacatgtacgactatcttcttgatgctgaaactcaattg
ggaacggatacaaccagtaataatgtggctgattattctgtggagggtggcaatgctgta
cctgttgctgcgggtgctggagatactaatatatgtggcggaatagttcagttgtattgg
gataatattctggagagatgtttggactttaatgaacaaattcgcagctctgcccttaag
attgttgaagttgtgctgcgccaagggcttgtgcaccctattacttgtgttccattcctc
attgcactggaaacagatccactggaggccaattcgacattagcgcatcatttgctgatg
aatatgaatgaaaagtacccttcattttttgaaagccgactaggggatggccttcaaatg
tcttttggatttatacaatccatacgtccaagtactgaacgtgagaacacaaaaccacca
tcaaaggcttctggaaatgcaaagggaaaagttgatgatgtttcttttgctcaagcaaga
ttgggagtctctcgaatctacaagcttattcgtgctaaccgtgtttcaaggaacaaattt
atgtcctcaattgttcgcaagtttgataatcctatctggaccacttcagtagtccctttc
ctcatgtactgcacggaaatacttgccttgctgccattcacaacacctgatgagcccctt
tatttagtctatgctataaatagagtaatacaagttaaggctgggcaacttgaagcaaag
ctgaaagctctgacattgcatctgttacaaagaggtgcaccccgtgggaatggcgtaatt
aaagaggacccagctgctccgccctttacaagaggaatggcatcagtggatttgaatggg
acaattgaaccagaatcagcttattacatggcagctatggatttgaatgggacgattgaa
caagacccagctgatcagtctgtctcaaatcaagataccgtgttagaggcaaagatgcac
ggtaaaggttctgtcagttcctctggcatctcaatagatgatgtacagataatccaggca
gactgcctggcagctattgcattgcagcttcttttgaaactgaagagacacctaaaaatt
gtgtatagcttgaatgatgctaggtgccaggctttctctccaaccgatcccattaaacct
ggagatgctttctccaagcagagcattccttttgacgtcagtgacacacatactaacttg
cctggaacttatcaagaattggtacaaagatatcaggaattcaagaatgcgttgaaggat
gatacagttgatttctcaacttacacagcaaatctcaaaagaaaacgtccggcccctagg
aaaggaaggaaatctggagttagagatgatgaggatgacaatgatgatgatgaagattgg
tcaggtggggctcggaggctgagttatagtgggaggagaggtggccacagtagaagtcga
caacgatag
DBGET
integrated database retrieval system
