Rosa chinensis (China rose): 112186636
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Entry
112186636 CDS
T06020
Name
(RefSeq) homeobox-leucine zipper protein HDG1 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112186636
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
112186636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
SidM_Rab1-act
Homez
Motif
Other DBs
NCBI-GeneID:
112186636
NCBI-ProteinID:
XP_024180881
LinkDB
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Position
1:64034470..64039990
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AA seq
808 aa
AA seq
DB search
MNFGGLISNSGGVGGSRVVAEIDPHSSGGAIAQPHFIPNSMQTSSALSLSIVQKNMDGHN
ELDLIAESFDPGIIGRLREEEFDQSRSGSDHFDGASGDDQDPVDEDDRPRRKKKYHRHTP
SQIQELESFFKECPHPDEKQRLDLSRRLGLETKQVKFWFQNRRTQMKTQLERHENIILRQ
ENDKLRAENGVMKEAMSNPICHNCGGPAIPGQISFDEHQLRIENARLNDELSRICTLAQK
FLGRPISNLAAPRSLPSSTAGLDLAMGINGMGCLNAGASNQLSMGFELGDGVGSSSPVMP
LMKPVMGMPNDLQHMTDRHVYLELAGEAMDELVRMVQADTPLWMKSSDGGSETLNVELYR
TFSCISTRQSGLVTDASRDSCMVIINSLALVETMMDANRWTDMFPTLVARASTIGMISSG
PNGTRNGTIQMMHAELQMLSPLVPVRPLKFLRFSKQHAEGVWAVVDVSIDIQQDASSVNC
RRLPSGFIVQDMPNGYSKVTWIEHLEYNESGVHQLLQPLLRSGIGFGAQRWLATLQRECE
SLTFLMSSTNPNEVPRAGLSMNSKKSMLRLAQRMMQSFCSGVCGSSVRQWDKLCIDNVSD
NVRVMVRQSLEVGEPSGFVLSAATSVWMPVSRSRLFDFLRDWQLRGQWDILVSCRPLQAM
VQVDKDHGGGNSVSLFNAKGLDANNNNNMLMFQETRTDASGSIVVYAPITSTSSDIMRDV
VYEGGDSTYVELLPSGFAILPCVTSDHVKGEGNGSDDGGCLLTVGFQIVCDGGQPTSKLT
MHSVKTVIDLISSTIQKIKSALQINDGP
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaattttggaggtttgatcagtaatagtggaggtgttgggggttcaagagttgtggct
gagattgatccacacagcagtggtggtgccattgctcaaccgcactttattcccaattca
atgcagacttcctctgccctctccctttcaatagtgcagaaaaacatggatgggcacaat
gaacttgacctgattgctgagagttttgaccccgggattattgggaggttgagggaagag
gagtttgaccagagccggtcaggcagtgaccactttgatggggcatccggtgatgatcaa
gaccctgtcgacgaggatgatcggccacggaggaagaagaagtatcatcgtcataccccc
agccaaatccaagaactggaatctttctttaaggaatgcccacatcctgatgaaaagcaa
aggttggacctcagcaggaggcttggcttggagactaagcaagtcaagttttggttccag
aatagaagaactcaaatgaagactcaactggagcgccatgagaatataattcttaggcaa
gagaatgacaagctccgagctgagaatggtgtgatgaaggaagctatgtcaaatccaata
tgccacaactgtggtggccctgccattcctggccaaatttcatttgatgaacaccaactg
aggattgagaatgctcgactgaatgatgaactgagtcgaatttgtactttggcacaaaag
ttcttgggcaggcccatttcaaacttggctgctccccgctctcttccaagctcgactgcc
ggtctagacctggcgatgggaataaatgggatgggttgtttgaatgctggagccagcaat
cagttatcgatggggttcgagttgggagatggtgttggaagctcttcacctgtgatgcct
ctaatgaaaccggttatgggaatgccaaatgatttgcagcatatgactgatagacatgtt
tacctggagcttgcaggcgaagctatggatgaattggttaggatggttcaagcagatacc
cctttgtggatgaaaagttcagatggtggaagcgaaacattgaacgtggagctgtacagg
acattttcttgtatcagtaccaggcaaagtggcttggtaactgatgcttcaagggattct
tgtatggtgatcataaacagcttggctcttgtagagactatgatggatgcgaatcgatgg
acagatatgttccctactttggttgctagagcctccaccattggcatgatttccagcggc
ccaaacggaaccagaaatggtactattcaaatgatgcatgccgagcttcaaatgctttcg
ccattggttccagtccgtccactcaagttcctccgtttttccaagcagcatgcagagggt
gtgtgggctgttgtcgatgtttccattgacatccagcaagatgcttccagtgtgaactgc
cggaggcttccttctggcttcattgtgcaagatatgcccaatggttactccaaggtgact
tggatagaacatttagaatataatgagagtggtgttcaccaattgttacagccattacta
cgttctggtattggctttggtgcacagaggtggcttgccactctccagagggaatgtgag
tccctgactttcctcatgtcctctaccaatcctaatgaagttcctagagcagggttaagt
atgaattcaaagaaaagcatgctaaggttggcacagcggatgatgcaaagcttttgttct
ggggtttgtggctcatcagtgcgccagtgggacaaactctgtattgataatgttagtgac
aacgtgagggtaatggtgcgtcagagtttggaggtcggtgagccatctggcttcgtgttg
agtgctgcaacatctgtttggatgccagtatcaaggtcaagactgtttgatttcttgcga
gactggcaattaagggggcagtgggacattttggtcagctgtcgtccactgcaagccatg
gttcaggttgacaaggatcacggaggtggcaacagtgtttctctctttaatgccaagggt
cttgatgccaataacaataataacatgctgatgttccaagagactaggacggatgcttca
gggtcaatagttgtgtatgcaccgatcacttcaacaagttcagatatcatgagggatgtt
gtgtacgagggtggagattctacttatgtagaactcttaccatcaggatttgcaatcctt
ccttgtgttacttctgaccatgtcaaaggagaaggaaatggctctgatgatgggggatgt
ctgctgacagttggattccaaattgtgtgtgatggtggccaaccaacatccaagctcact
atgcactcggttaagactgttattgatcttatctcctccaccattcagaagatcaaaagt
gcccttcaaataaatgatggcccttga
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