Rosa chinensis (China rose): 112186854
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Entry
112186854 CDS
T06020
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X6
KO
K08739
DNA mismatch repair protein MLH3
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112186854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112186854
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
112186854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
112186854
NCBI-ProteinID:
XP_024181157
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All DBs
Position
2:9794375..9801965
Genome browser
AA seq
1262 aa
AA seq
DB search
MRSLRRLPEAVRSSIRSGVILYDVARVVEELVFNSLDAGARKVSVFVGIGTCYVKVVDDG
CGITRDGLVLLGERYATSKFEQFTEADAASVSFGSRGEALASISDVALLEVVTKASGRPN
GYRKVMKGFKCLYLGVDDDRKDVGTTVVVRDLFYNQPVRRKCMRSSPKKVLDTVKKCVHR
IALVHSMVSFKVVDMESEDELLRTIPSPSPMTLLESAFGSEVSDALHELNISDGKLELSG
YISTPCNSLAIKAIQYFYINSRFICKGPIHKLLNQLASSFECWDPGTAAVGSRNRKRSRP
QAFPVYVLNLSCPQSFYDLNFEPSKTYAEFKDWGPVLNFIDKAIQSFWKEKISYVESVCH
GADIRSEGQMWEERDNTVSVDENLLDVDLSEMSPIRKKRSRIQDLETSPDIMKILSKEGS
DVSQRKYIRIPFDYLHENTDDVKGFKDRDSEIDFRHDSDYSFQPQDQNLAKCMVATTLKR
ENHSWMSDINFSPDEDYMMDSGYSAAKRSSNLEDNMFTSAWQDQPFKLCASVSKVSADTG
VSHHDFSSNVEVTCDLRQPFLNSCSSRGRLPSERDLLTESGIKCQNDYFGSKRMQDGSYN
TLDFSEIDGSSKRIRSGSYNSVEVPDISSMTSSPGMVSSAQPYARVRSKFDPFAEFDPLS
RANLNSIPSCKGRLDEASLDISEEYIGSCNQTLKTEWYSVTSNPLSQSTYLDFEPFSNED
SVEGHYRYKYDKRDTDKYFVDAEEFECSFGSDIVSNIREHCITDIDCGLGYNDNAGSRKF
LHQDNIDREFSSGRRGKLAYETDWLSWHSRSKDNICIDMHNRHEEQSKYRDCLKSHVLNR
RSIRSHSAPPFPRSKRKYFTLNHPATTAGKHDAQTFHDSATYPEAGTVKDLCQPRNGNHQ
NLKTTSVEDLLLDTRPDINAGASKMQKLEMFEQSKRSEVQATAPIKEIISMNQDSLNCGT
KWRNCCPQIISKSKVHGVQDGNDILDISSGFLNLAADSLVPESLHKNCLKHSRVLQQVDK
KFIPVMAGQTLAVIDQHAADERIRLEELRHKVLSGDGEAKTVTFLDFEQELVLPEIGYQL
LHNYAKTIEEWGWRCNIHAQDSGSFKRYFTCPSWNLNFLHRQPTVITLIAVPCILGVNLS
DVDLMEFLQQLSDTDGSSTMPPSVLRILNSKACRGAIMFGDSLLPSECCLIVDELKQTSL
CFQCAHGRPTTAPLVNLEALHKQIAKIASLNLNNGADQAWHGLHQHELSLARAEQRLNSA
TS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcttgaggcggttgccggaggcagttcggagctcgattcggtctggggtgatt
ctgtatgacgtggctagggttgtggaggagctcgtctttaatagcttggacgctggcgca
agaaaggtgtcagttttcgtaggaattgggacttgttatgtgaaagtagttgatgatgga
tgtgggattactcgtgatggattggtgttgttgggagaaagatatgccacgtcgaagttt
gaacaatttactgaggcggatgctgccagtgtgagctttggttccagaggggaagcactg
gcttcgatttctgacgtggcattgcttgaagttgtaaccaaagcttctgggaggccaaat
gggtatcgcaaagtgatgaagggattcaaatgtttgtatcttggggtagatgacgatagg
aaggatgttggcacaacagttgttgttcgtgatttgttttacaatcaaccagttcggagg
aagtgcatgcgatccagcccgaagaaggtattggacactgtcaagaaatgtgtacacagg
atcgcactggtgcactcaatggtttccttcaaagttgtcgatatggagagtgaggatgag
cttcttcgtaccattccttctccttctcccatgacattattggaaagtgcttttgggagc
gaggtctctgatgcacttcacgaattgaacataagtgacggaaaattagagctttctgga
tacatatctactccttgcaatagtctcgccattaaggccatccaatatttctatattaat
tcacggttcatttgcaaaggaccaattcacaaattgcttaatcaattggcctctagcttc
gaatgctgggacccagggacagctgctgttggatcccgcaacaggaagagaagtagacct
caagcattcccagtttatgtcttgaatttaagttgtccccaatcattctatgatttaaac
tttgaaccatcgaagacatatgctgagttcaaggattggggtcctgtactcaactttatt
gataaggccattcaaagcttctggaaggaaaagatatcctatgtagaatctgtttgtcat
ggagctgatatacgaagcgaaggtcaaatgtgggaggaacgtgacaacactgtatctgta
gatgaaaatttgctggatgtagatttgtcagaaatgtctccaataaggaaaaagaggagc
aggatacaagatcttgagacttctccggacattatgaagattctaagtaaagagggcagc
gatgtatctcagaggaaatatatcagaattccatttgactacttgcatgaaaatactgat
gatgtcaaaggcttcaaagatcgagatagtgagattgattttcgtcatgatagtgactat
tcatttcaaccacaggatcagaatcttgctaaatgtatggtcgcaacaactctgaagagg
gaaaatcatagttggatgtctgatatcaatttttcacctgatgaagattatatgatggat
agtggctactctgctgccaaaagatccagtaatttggaagataatatgtttacctcagca
tggcaagatcagccctttaaactctgtgctagtgttagcaaggtttcagcagatactgga
gtatcacatcatgatttcagtagcaatgtagaggtcacctgtgatttaagacaacctttc
ctcaatagttgttcctcccgaggaaggcttccatctgagagggatttgcttacagagagt
gggattaaatgtcaaaatgattactttgggagcaagagaatgcaggatggctcttacaac
actttagacttttcagaaattgatggcagcagcaagagaattcggagtggttcttataac
agtgtagaagttccagatatctcttcaatgacttcatccccagggatggtttctagtgct
cagccctatgccagagttagatcaaagtttgacccgtttgcagagtttgaccctctgtca
agagctaatttgaattcaattccatcctgtaagggccgtttagatgaggcaagtttagac
ataagtgaagagtatattggttcgtgcaaccagaccttaaaaactgaatggtactctgtg
acatccaatccgttatcccaaagtacctatttggattttgaacctttctctaatgaagat
tcagttgaagggcattacagatataaatatgataagagggatactgacaaatattttgtt
gatgctgaagaatttgaatgcagctttggatcggatatagtgtcaaatatcagagaacac
tgcattacagatatagactgtggactaggttataatgacaatgctggttctagaaaattc
cttcaccaagacaatatagatagagagttttctagtggacgccgaggtaaattagcttat
gagacagactggttaagctggcattcacgcagcaaagataacatttgtattgacatgcat
aatagacatgaggagcagtcaaaatatcgggattgtctcaagagtcatgttttaaacaga
agatcgatacgaagccactcagctccaccatttcctagaagcaagaggaagtacttcact
ttaaatcatcctgcgacaacagcaggcaaacatgatgcacaaaccttccatgattcagct
acttatccagaagctggcacagtgaaggatctctgtcaacctcgtaatggtaatcatcaa
aatttgaagacaacttctgtggaggatttattgttagacaccagaccagatattaacgct
ggtgcaagcaagatgcaaaaattggaaatgtttgaacaatctaaaaggtctgaggttcaa
gccacagctccaattaaagaaattatatccatgaatcaagattcgctgaattgtgggacc
aaatggcggaattgttgtccccaaattataagcaaaagtaaagtgcacggtgttcaagat
ggaaatgatatacttgacatatcttccggattcttgaatcttgctgctgactcattagtt
cctgaatctctccataagaactgtctcaagcattccagagttcttcagcaggtggataag
aaatttattccagtcatggccggccaaacacttgctgttattgaccagcatgctgcagat
gaaaggatccgattggaggagctgcgtcacaaggttttgtctggagatggagaagcaaag
accgttacttttctggattttgaacaagagctggtgctgccagagattggttaccagtta
ctgcataactatgctaaaacaatagaagagtggggttggcgctgcaacatacatgctcaa
gattcagggtctttcaagaggtactttacttgtccttcctggaatttgaatttccttcac
aggcagccaaccgtcatcacacttattgcggttccctgcatcttaggtgtcaatttatct
gatgtagatcttatggaatttcttcagcagctttctgatacagatggatcatcaacaatg
ccaccatctgttcttcgaatcctaaattctaaagcatgtagaggtgcaattatgtttggg
gattccttgctaccttcagagtgttgcctcatcgttgatgagctaaagcagacctcattg
tgtttccaatgtgctcatggtcgaccaacaaccgccccactagtaaatttggaagcgttg
cacaagcaaatagctaagattgcatctttgaatctgaacaatggtgcagatcaggcgtgg
catgggttacatcaacatgagcttagtcttgcacgtgcagaacaacgtttaaactcggct
acaagctag
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