Rosa chinensis (China rose): 112186880
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Entry
112186880 CDS
T06020
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112186880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112186880
03036 Chromosome and associated proteins [BR:
rcn03036
]
112186880
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112186880
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112186880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
Nucleoporin_N
NUP160_helical
TAF1_subA
ATG33
DUF7874
Motif
Other DBs
NCBI-GeneID:
112186880
NCBI-ProteinID:
XP_040370154
LinkDB
All DBs
Position
2:complement(41539297..41555193)
Genome browser
AA seq
1514 aa
AA seq
DB search
MEVPILGSDSLKWIEFPIPSSNAATATATATATATATATATATATATAVADTCAPLTHDC
ASSIAIGDPPTHLIWRIHKHLPHSLELLELSANKEFPKLGLRITFPQALSSSVFLCKNEI
DVGSRSHPYLLYALTVAGVAYLLRLGTVSSYASNSVIREFSLHPYGPITSAAATPTGCLV
VGRNDGSLACFQLTLESTAPGFLQELRDDPGIGSLWGFMSRGRMVGAVQDLAISMVHGKP
LIFVIHTDGVLRVWDISFHSRLFSHKMNSLTMAGAALVRLWVGQADNDSSIIPLAILYRH
DSEMSSETIYVYSLHCNVGDRIVLSMDPSEQIIPIEEDGWIDVKLISNKICILKNQGLVL
HKLLHTNVNMQVVDAVCYALQEDFVADQLFQSSEHSSDDLLLITHSIFSSSKDHILPVVS
SIFLRRLLLPGIHHNAALRTTLLDYNRHWTESDFHSLTADGLKKEILSLIEHEGLTGNSS
SIFCCWKIFCARYFQNWCKSNAPCGLLVDSSTGTVGLIRKSSVSLFRSLEDIERVNDGSL
DELGNFPSFGLDSFDEARDCELLAEMLRCVINVSQQLGKTASAIFYESLISAPPVISSED
IIPRLLKILETGYSSTAAVLHISDLGPDVAWEKNLADHKNLRKFSIDMMLSLHALHEKSG
TWSRILSVIENYLKYLIPRKIIQKFDAVVALDINASILVQAMSQVAKVMFESALDIHLFL
SYLVSISGQINMLHDDISKIQLELVPMIQEIIYEWLLLHFFATTPSESAAIEDFSSQLSL
LQIDSNTGRRSWNEKLGKCEFTLAFIFLLNVRSSSKDQSHFCSRSISNVQDIIDSIREFA
SWIMWGQNRESLTVLRRAADLALILLRHGQYDAVEHLLTIVEAHLQKEKTSHRVQATDGG
WCILHHLLGCCYLAQAHRGLHGVLKERKVHEAVCCFFRAASGNGSAQALQSLPQEAGLPH
LGIDGSISDAAWKLHYYQWAMQIFEQYNISEGACQFALAALEQVEEAYSANTESHDRAPF
DESVSTIKGRLWAHVCKFTLDLNLFYDAYCAIISNPDEESKHIWLRRLIIVLYERGAIKI
LCGGQLPFIGLTEKVEQELPWKAERSDILARPNLYKLLYAFEMHRHNWRKAASYMYLYSA
RLRTETSLKGYQQLWRALKEILNGLSAAINALHLVHPAYAWIDPLLERNAIHNEQYPSKK
ARITIEDQSASNDVDPQSWKSYIDIQKIENEFVLTSAEYLLSLAHVKWTNTGTQKAPLEL
VDLLIQTNLYDMAFTVLLRFFKGSELKRGLERVFSAMSLKCCPHIVNSSRVGDDSTTQGL
LLTSSKDEVIVHGSPDTSSANQQSSGINQWGTLELYLDRYKVFHARLPFIVAETLLRTDS
QIELPLWLVKLFKDGRREKTLGMTGQESSPALLFQLYVDYGRYREATNLLLEYIGSLASM
RPANIINRKRPFGVWFPYTTIQRLWCRLEEMINSGHMVDQCKQLKDLLHGALLKHLQLVK
VDSEDALESFQKIR
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgccaatcctcggcagcgattcactgaaatggattgagttccctattccttct
tctaatgccgccaccgccaccgccaccgccaccgccaccgccaccgccaccgccaccgcc
accgccaccgccaccgccaccgccgttgctgatacttgtgcccctctcactcacgattgc
gcttcttccatcgccattggcgaccctcctacacatctcatatggagaatccacaagcat
ctccctcactctctcgaattacttgagctctctgctaacaaagaatttccaaaactcgga
ctgcgaatcacttttccacaagcactctcttcctccgtttttctttgcaaaaatgagatt
gatgtcggttccaggagccacccctatttgctctatgcattgaccgttgccggagtcgct
taccttttgagacttggaaccgtctccagttatgcttccaactctgttattagagagttt
agcttgcatccctacggacctataaccagtgccgcagcaacgccaaccggatgtcttgtt
gtaggtcggaatgatggctcacttgcttgctttcaactcacacttgaatccactgctcct
ggttttctgcaagagctacgggatgatccaggaatcggtagtttgtggggtttcatgtca
aggggtaggatggtaggcgctgtgcaggacttggctatatctatggttcatgggaaacca
cttatattcgttattcatacggacggggtgttacgagtatgggatatatcatttcatagc
aggctcttttcccataagatgaacagtctaacaatggcaggagctgcattggtaaggttg
tgggttggtcaagctgacaatgattcgagcataattcctttggcaatcttgtacagacat
gattcggaaatgagctcagagacgatctacgtatatagcctccattgtaacgtgggagac
agaattgttttatcgatggatccttcagaacaaattattcctattgaggaggatggatgg
attgatgtcaaacttatttccaacaagatatgcatattgaaaaatcagggactggtgctt
cacaagttgttgcatacaaatgtcaacatgcaagtggtagatgcagtttgttatgctttg
caagaggacttcgttgcagatcaactctttcaaagttctgaacattcttcggatgacctt
cttttgataactcattcaatattttcatcttcaaaggatcatattctacccgttgtatct
tctattttcttacgtaggctgcttcttcctggcattcatcataatgctgctttgcgcaca
actttgttggattataataggcactggactgagtcagatttccactccttaactgctgac
ggtttgaagaaggaaattctttccctgattgaacatgagggtctgactggtaattcatcg
tcaatattttgctgctggaaaattttttgtgctcgctatttccagaactggtgcaagagc
aatgcaccatgtggcctacttgttgattcctcaaccggcactgttggtttaattagaaag
agttcagtatctctttttcgttctttggaagatattgagcgggttaatgatggctctttg
gatgaacttggcaattttccaagctttgggttggattcatttgatgaggctcgtgattgt
gagctacttgctgaaatgctcagatgtgtcattaacgtcagccagcaattgggcaaaaca
gcttctgctatattttatgaatcactcattagtgcaccaccagttatctcatctgaagac
attattccgcgcctattgaagatattagaaactggatatagttcaacagccgcagtgctt
catatatcagatcttggacctgatgttgcctgggagaaaaatctagcagatcacaaaaat
ttgaggaaattttcaattgacatgatgttgtctcttcatgctttgcacgagaaatctggc
acatggagccgtattttgagtgtgattgagaactatctaaagtatctcatacctcggaaa
attatacaaaaatttgatgctgtagtagcattggatatcaatgcctccatcttggtccag
gccatgtctcaagttgcaaaggttatgtttgagtctgcactggatattcatctgtttcta
agctatctagtaagcattagtgggcagatcaatatgctacatgatgatatatccaaaata
cagcttgagttggttccgatgattcaagaaatcatttatgagtggcttctcttacatttc
tttgccaccacaccatctgaatcagctgcaattgaagatttcagctctcaactttcattg
ttacaaattgatagcaacacaggcagaagatcatggaatgagaagcttgggaagtgcgag
ttcactctggcttttatattcttacttaatgttagaagttcctccaaagaccagagccac
ttttgttcaagaagcatatcaaatgttcaggacataattgattcaatacgagaatttgct
agctggatcatgtggggccagaatagggaatcccttactgtcctgaggcgtgcagcggat
cttgcattgatcctgctaaggcacgggcagtatgatgctgttgagcacctactcactatt
gtggaggcacatttacaaaaggagaagacttctcatcgtgttcaagctacagatggcgga
tggtgcatactgcatcatcttttaggatgctgttatcttgctcaagcacatcgtggatta
catggggtcctgaaagagaggaaagttcatgaagctgtatgttgtttcttcagagctgca
tctggaaatggctcagctcaggctttacaaagcttgcctcaggaagcggggttgccacat
cttggcatcgatggtagcatatcagatgctgcatggaagctccattactatcagtgggca
atgcagatatttgagcaatataatattagtgaaggtgcatgtcagtttgctcttgctgcg
cttgagcaagttgaggaagcgtatagtgcaaacactgagtcccatgacagagctccattt
gatgaatcagtatctaccattaaaggaagactttgggcacatgtttgcaagtttacttta
gatctcaatctcttttatgatgcgtactgtgcaataatttcaaatccagatgaggagagc
aagcacatctggttgaggcgtcttataattgttctttatgaacgtggtgccataaagatt
ctttgtggtggtcagctaccattcattggtcttacagagaaggtagaacaagagcttcca
tggaaggcagagcggtcagacattttagcgaggccaaacttatataagttgctttatgca
tttgaaatgcatcggcataactggcgaaaagcagcaagctacatgtacctttattctgct
cgtttgagaactgaaacatctctgaaagggtaccagcaattgtggcgagcactgaaggag
atactgaatgggctctctgctgctatcaacgcacttcatcttgttcatccagcatatgct
tggattgatcctctccttgagagaaatgctattcacaatgagcagtatccaagtaaaaag
gctagaataacaattgaagaccagtcagcaagcaatgatgttgatcctcaaagttggaaa
tcttatatagatattcagaaaattgaaaacgagtttgtgcttacttcagcagaatatttg
ctttcactagcacatgtcaaatggacaaatacaggaacccagaaagcaccattggagttg
gttgatctcttgatccagacaaatctatatgatatggcatttacagttctcttaagattc
ttcaaaggttcagagttaaagaggggattggaaagagttttctctgctatgtcactaaaa
tgctgtccgcatatagttaattcgtcaagggtcggggatgattccacaacacagggtctt
ctgttgacttcttcaaaggatgaagtgatcgttcatggttcaccagatacaagttcagca
aatcaacaatccagtggaattaatcaatggggaactctcgagctctatcttgaccgatat
aaagtcttccatgcacgtctaccatttattgttgctgaaactcttcttcgtacggattct
caaatcgaactgcctctttggttggttaaattattcaaggatggcaggagggaaaagaca
ttggggatgactggccaagaatcaagtccggcattattatttcaactatatgttgattat
ggtcgatatagagaagctacgaatctgttgcttgagtacataggttctttagcatccatg
agaccagccaacatcattaatcgtaaaagaccatttggagtttggtttccatatacaaca
attcagcgcctctggtgccgactcgaggaaatgataaattcaggtcacatggtagatcaa
tgtaagcagctcaaggatttgctacatggagctttgctgaaacatctccaactggtaaaa
gtggactcggaagatgcactcgagtcatttcagaaaataagatga
DBGET
integrated database retrieval system
