Rosa chinensis (China rose): 112186942
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Entry
112186942 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112186942 isoform X1
KO
K17925
sorting nexin-13
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rcn04990
]
112186942
Domain-containing proteins not elsewhere classified [BR:
rcn04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112186942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
112186942
NCBI-ProteinID:
XP_024181288
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Position
2:complement(56077174..56083937)
Genome browser
AA seq
1114 aa
AA seq
DB search
MSTPRQLVNVRDLVEEAKKRIVFLAVCVVGLSYLMSLTSSNVLVNLPAAASLIVILRYLS
LDYDMRRKAAAYNNKPPPANNAFQTKPIPLPNTVGKSEWRRKVNSPVVEKAIEHFTRHLV
SEFVTDLWYSRLTPDKQGPEELVCIINSVLGELSARVRNINLIDLLTRDLINLICSHLEL
FRITQAKIPKQQSELMTIEKRDMELRLVLDAENKLHPALFSAEAEHKVLQHLMDGLISLT
FKREDLQCTLFHYIVRELLACAVMRPVLNLASPRFINERIEQLVIKMNESKGVTTGQKEF
LSKQEESSSISSDHFSRYLDPSVTGVELVQLKNGQSRTSADRRAAENVNGSKDPLLSIDT
PSSRPWNSLRMNSQSINERVVEQHNAGGEWGDMLDLISRRKTQALAPENFENMWAKGRNY
RKKEGENSITAQVPKGSSGGKSIAGDHTREKSNPTDKQNVSKLNLTSQSGSTNRVRVNNS
FHPEGQNILNRSPGALYEEDDQHSPMRLVETDSGSSTSYTSEDQESDGATGLDSPGTKVW
DGRSNRGMTVSHIHHPLENSERHIAKKTGKGNQRFQRSRQKKSKPSNTKLPVWQEVERTS
FLSGDGQDILKSLKGHAHIEDSSDDSENENFGRINSGAATSSSAPSVSDNSLKNSLAVDS
FFKLKCEVLGANIVKSDCKTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFPQYNL
HLPPKHFLSSGLDLLVVQERCKLLDKYLKELMQLPTISGSIEVWDFLSVDSQTYLFSNSF
SIIETLSVGLDDKPSEKSKRALNFGEPVIDPFSSKREQIGIGIKDSTLQVKNNAVGDGLR
LNAKGSSSPVKNPGKDFGNPLNTPGTCSSTGGQKQESSLMNSGKTSKEREEQEYELFLDA
ATDPTLPMEWVPPNVSVPILDLVDVIFQLQDGGWIRRKAFWVAKQILQLGMGDAFDDWLI
EKIQLLRKGSIVASGIKRIEQILWPDGIFISKHPKRRPQPSSNLAQNSPQGQRPMAISSP
RLDEQQQQEADRRAKFVYELMIDNAPTAIVSLVGTKEYDKCAKDLYYFLQSSVCLKQLAF
DLLELLLSSAFPEMEHVFKQVHEEKHRFGEFKAQ
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgccaaggcagcttgtgaatgtccgtgaccttgttgaggaagccaagaagcga
attgtcttcctcgccgtttgcgtcgttggcctctcatatctcatgtccttgacaagctcc
aatgttttggtcaacttgcctgccgctgcttccttgattgtaatccttcgctacttatct
ctggattatgacatgcgaagaaaagctgctgcatacaacaataaaccacccccagcaaat
aatgctttccaaaccaaaccaattccattgcctaacacggttggaaagtctgagtggaga
agaaaagttaattctcctgttgttgagaaagctatagaacattttaccaggcatctagtt
tctgagtttgtgacagatctatggtattctcgtctaacaccagataaacaaggtccagag
gaactggtgtgcattatcaatagtgtccttggggaactttcagcacgcgtgaggaatata
aatctgattgatcttctcacaagggaccttatcaatctgatatgctctcacttggaactt
tttcgcataacacaagcaaagattccaaagcaacaatcagaattgatgacaattgaaaaa
cgagatatggaattaagactcgtcttggatgctgaaaacaaattgcaccctgctctattt
tctgctgaagctgagcacaaggttttgcagcatctgatggatggccttatttctctcaca
ttcaagcgtgaagatctgcagtgcactttgttccattatattgtcagagagcttcttgct
tgtgcagtaatgcgtcctgtcctaaacttggctagtccaaggtttattaatgaaagaatt
gagcagttggtcataaagatgaacgaatctaaaggtgttaccacaggacaaaaggaattt
ttatccaaacaagaggagtcgtcgagtatttcatctgatcacttctctaggtacttagac
ccttctgttacaggtgttgaacttgtgcaattgaaaaatggacagtccagaacttctgca
gacagacgtgcggcagaaaatgtgaatggatcaaaagacccattgctttcgattgatact
ccatcttctcgtccatggaactcattgcgaatgaactcccaaagtatcaatgaaagggtt
gtagaacagcataacgcaggaggagaatggggagacatgttagatctgatatctcgcaga
aagactcaagcccttgctcctgaaaattttgaaaatatgtgggcaaaagggagaaattac
agaaagaaggaaggtgaaaattcgataacggcgcaagtcccaaagggttcttccggaggg
aagtcgattgcaggggatcatactagggaaaaatctaatcccaccgataagcaaaatgta
tctaagctcaatctgacctctcagtcaggatctaccaatcgggttagagtaaacaactct
ttccacccggaaggtcaaaacatactgaatcgctctccaggtgctttgtatgaggaagat
gatcaacacagtcctatgaggttggtggagaccgactcaggaagcagtacttcttatact
tctgaagatcaagaaagtgacggtgcaacaggtcttgattctcctggaactaaagtttgg
gatggtagaagtaatagaggtatgactgtatctcacatccatcacccacttgaaaattct
gaacgtcatattgcaaaaaagactggtaaagggaatcagcgctttcaaaggtctaggcag
aaaaaatctaaaccaagcaatacgaagttgcctgtttggcaagaggttgagagaacaagc
ttcttgtctggagatgggcaggacatactcaaatctttaaaagggcatgcccatattgag
gactctagcgatgattctgaaaatgaaaattttggtagaattaacagtggagcagccact
tcttcatctgcaccatctgtatctgataattccctgaaaaattctttggcagtggattct
tttttcaagttgaaatgtgaggtattgggtgcaaatattgtcaagagtgactgtaaaaca
tttgctgtatattccatatctgtgacggatgtaaataacaatagttggtcaatcaaaaga
agatttcgccattttgaggagctacatcggcgtttaaaagagtttcctcagtataacctt
catttgccaccaaagcattttctgtcaagtggtttggatttacttgttgttcaagaaaga
tgtaaattgcttgacaaatacttaaaggagcttatgcagcttccaacaatctcagggtcc
attgaagtttgggacttcttaagtgtcgactcccagacttatttattttcaaattcattt
tctataatcgaaacactgtcagttggtctagatgataagccatctgaaaagagtaaaagg
gctttaaatttcggtgagcctgtgattgatccattttcctcgaagagggaacaaattggc
attggaattaaggattccactttacaagtgaagaataatgctgttggagatggactaaga
ttaaatgcaaaaggctcttcttctccggtcaaaaatcctggcaaagattttggaaatcca
ctcaatactcctggcacatgttcaagcactggaggacaaaaacaggaatcttctctcatg
aactccggaaagacttcaaaagaaagggaggaacaggaatatgaattgtttcttgatgct
gctacagatcctacccttcctatggagtgggtgcctccaaatgtaagtgttccgatatta
gatttggtagatgtcatttttcagctccaagatggtggatggatcaggcgcaaggctttt
tgggtggccaaacaaatactacaactagggatgggtgacgcctttgatgactggttaatt
gagaaaatccagcttttgcgtaagggatcgattgttgcttctgggattaagcgaattgag
cagatactctggcctgatggaatatttataagcaagcatccaaagcgacgaccgcagcca
tcttcaaatttagcccaaaattctcctcagggtcagagacctatggcaatatcatcccct
agacttgatgagcagcagcaacaggaagcagatcgacgtgcaaagtttgtttatgaatta
atgatcgataatgcaccaactgctattgtcagtcttgttggtaccaaggagtatgacaaa
tgtgccaaggatctctattactttcttcagtcatctgtttgcttaaagcaactggctttt
gaccttctcgagctactgctttcatctgcatttccagagatggaacatgtatttaagcag
gtgcatgaagaaaaacataggtttggtgagttcaaagcacaatag
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