Rosa chinensis (China rose): 112187031
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Entry
112187031 CDS
T06020
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112187031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112187031
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112187031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
112187031
NCBI-ProteinID:
XP_024181417
LinkDB
All DBs
Position
2:73371377..73377258
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AA seq
476 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSTFGEVVEAVIMKDRTTGRARGFGFVVFADPTVA
DTVIMEKHNIDGRMVEAKKAVPRDDQNILSRSSVSIQGSPGPGRTRKIFVGGLASTVTEG
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYTPSTVGGFGLGRFSPVAGGRSGFP
PFGSGYGVGMNFEPGLNPGFGGSANYNSNVSYGRGVSPYFMNNSNRFSSPIGYDGGNGGN
SSFFSSVTRSLWGNGGLNTNSANSSAYMGSGSGTIGGSTFGNTGVNWRSSAISPQGGGNN
VSNNSGNLGYGAGDNTYGLGTGGYGRNSGTSAGPASSFNASNGGFDGAFNDFYSSGSVYG
DPTWRSSNSERDGPGPFGYGLGSAASDVSAKSSPGYVGGYSVNKRQSNTGNSDLTT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatagtggtaaattgtttattggcggcatatcttgggacacaaatgaagag
cgtctgaaagagtattttagtacttttggggaggtggtagaagcagtgatcatgaaggat
cggaccacaggccgtgctcgtggttttggttttgtagtatttgctgaccctactgttgcg
gatactgtcataatggagaagcacaacattgacggaaggatggttgaggcgaaaaaggct
gtccctagggatgaccagaacattttgagtagaagcagtgtgagcatccaaggttctcca
ggtccaggccgcacaagaaagatttttgttgggggtttagcatccactgtcacagagggt
gacttcaagaagtactttgaacagtttgggacaatcacagatgttgtagtgatgtatgat
cataacacgcagaggcctaggggctttggattcatcacttatgactcagaggaggcagtg
gataaggttttgctcaagacttttcatgaactgaatgggaagatggttgaagtcaagcgt
gcggttcctaaagagttatcacctggacccagtcgcagcccacttggaggatataactat
ggtctgagtagggtcaacagcttccttaatggctatactcagggatatactccaagtaca
gtcggaggctttggtcttggtagatttagtccagtggctggtggtcgaagtgggtttcct
ccatttggttcaggttatggagtgggaatgaattttgagcctggtttgaacccaggtttt
ggaggaagtgcaaattataatagtaatgtcagctatgggcgtggagtgagcccttatttt
atgaataattcaaataggtttagcagtcccattgggtatgatggtggtaatggaggaaac
tcatcctttttcagctccgtgactcggagtttgtgggggaatggggggcttaatacaaat
tctgcaaattcgagtgcttacatgggttcaggaagtgggaccattggaggaagcacattt
ggcaatactggggttaactggcggtcttcggcaatttcacctcaaggtggaggaaataat
gtttctaacaatagtgggaatcttggttatggagccggtgataacacttatggtttggga
acgggagggtatggaaggaacagtggtacaagtgcaggccctgcgtcttcattcaatgcg
tcaaatggtggttttgatggagccttcaatgacttttacagtagtggttcagtttatgga
gatcccacttggcgatcatcaaattccgagcgagatgggcctggaccctttggttatgga
cttggcagtgcagcttctgacgtttcagctaaaagttctcctggttatgttggtggatat
agtgttaataagagacagtcaaatacaggtaatagcgacttaactacctaa
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