Rosa chinensis (China rose): 112187033
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Entry
112187033 CDS
T06020
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112187033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112187033
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112187033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
112187033
NCBI-ProteinID:
XP_024181419
LinkDB
All DBs
Position
2:73390240..73396132
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AA seq
473 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
DTVIMEKHNIDGRMVEAKKAVPRDDQNTLSRNSGSIHGSPGPGRTRKIFVGGLASTVTEG
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGLSRVNNFLTGYTQGYNPSTVGGYGLGRFSPVAGGRSGFP
PFGSGYGMGMNFEPGLSPSFGGNANFNNNVSYGRGLSPYYINNSNRFSNPIGYDGNNGGS
SSFFSSVTRNLWGNGGLNTNSANSSAYMGSGSGSIGGSTFGNAGVNWRSSAISPQGGGNN
VSNNSGTLGYGAGDNSYGLGTGGYGRNSGATVGPTSSFAASNGGFEGSFTDFYSSGSVYG
DPTWRSSNSERDGSGPFGYGLGSAASDVSAKSSPGYVGGYSVNKRQPNTGIAA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatagtggcaagttattcattggtggcatatcttgggacacaaatgaagag
cgtctcaaagagtatttcagtgcttttggggaggtggtagaagcagtgatcatgaaggat
cggaccacaggacgtgctcgtggatttggttttgtagtttttgcagacccagcagtagca
gacactgtcataatggaaaagcacaacattgatggaagaatggtggaggcaaaaaaggct
gttcccagggatgaccagaacactttgagtagaaacagtggcagcatccatggttctcca
ggtccaggacgcacaagaaaaatatttgttggaggtttagcatctactgttacagagggt
gacttcaagaagtactttgaacagtttgggacaattacagatgttgtggtgatgtatgat
cacaacacccagaggccgagaggcttcggattcatcacttatgattcagaggaagcagtg
gacaaggttttgctaaagacatttcatgaactgaatgggaagatggttgaggtcaagcgt
gcagttccaaaagagttatcacccggtcccagtcgcagccctcttggtggatacaattat
ggtctgagtagggtcaataacttccttactggctatactcaggggtataatccaagtacg
gttggaggttatggacttggtaggttcagtccagttgctggtggtcgaagtggatttcct
ccatttggttctggttatggaatgggaatgaactttgagccagggttgagcccaagtttt
ggaggaaatgcaaattttaataataatgtgagctatggacggggattgagcccttattat
atcaataattcaaataggtttagcaatcccattggatatgatggtaataatggaggaagc
tcatccttttttagctcagtgactcggaatttgtggggtaatgggggtcttaatacaaat
tctgcaaattccagtgcttacatgggttcaggaagtggtagcattggaggaagtacattt
ggcaatgctggagttaattggcgttcttcagcaatttcacctcaaggtggaggaaataat
gtctctaacaatagtgggacacttggctatggagctggtgataacagttatggcttggga
accggagggtatggaagaaacagtggtgcaactgtgggccctacatcttcttttgctgca
tcaaatggtggttttgagggctcctttactgacttctacagtagtggttcagtgtacgga
gatcctacttggagatcatcaaattctgagcgagatgggtctggcccctttgggtatggg
cttggcagtgcagcttctgatgtttcagctaaaagttctcctggttatgttggtggttat
agtgttaataagagacagccgaatacaggaattgctgcctag
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