Rosa chinensis (China rose): 112187067
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Entry
112187067 CDS
T06020
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112187067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112187067
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112187067
mRNA degradation factors
5'-3' decay
Lsm complex
112187067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
112187067
NCBI-ProteinID:
XP_024181470
LinkDB
All DBs
Position
2:63944417..63946945
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AA seq
128 aa
AA seq
DB search
MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERVIVGEL
YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccggcccagaagatgtttacctctctacttctcttgccagctatcttgat
aagaaacttcttgtgctgctccgagatggtcggaagcttttaggagtacttcgttccttt
gatcaatttgccaatgctgttcttgagggtgcgtgtgagagggtcattgttggcgaactt
tattgtgacctccctttgggtctttacgtaattcgtggggagaatgttgttttaattggc
gagctggactcggagagggaggaacttccaccgcatatgactcgtgtttcacctgcagaa
attaaaagggcacagaaagcagaaagagaagcttctgatcttaaaggcaccatgagaaaa
agaatggagtttcttgacatggactaa
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