KEGG   Rosa chinensis (China rose): 112187067
Entry
112187067         CDS       T06020                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112187067
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112187067
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112187067
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112187067
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 112187067
NCBI-ProteinID: XP_024181470
LinkDB
Position
2:63944417..63946945
AA seq 128 aa
MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERVIVGEL
YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggccggcccagaagatgtttacctctctacttctcttgccagctatcttgat
aagaaacttcttgtgctgctccgagatggtcggaagcttttaggagtacttcgttccttt
gatcaatttgccaatgctgttcttgagggtgcgtgtgagagggtcattgttggcgaactt
tattgtgacctccctttgggtctttacgtaattcgtggggagaatgttgttttaattggc
gagctggactcggagagggaggaacttccaccgcatatgactcgtgtttcacctgcagaa
attaaaagggcacagaaagcagaaagagaagcttctgatcttaaaggcaccatgagaaaa
agaatggagtttcttgacatggactaa

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