Rosa chinensis (China rose): 112187089
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Entry
112187089 CDS
T06020
Name
(RefSeq) chloride channel protein CLC-b
KO
K05016
chloride channel 7
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112187089
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112187089
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112187089
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112187089
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112187089
Ion channels [BR:
rcn04040
]
Chloride channels
Chloride channel (CLC)
112187089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112187089
NCBI-ProteinID:
XP_024181503
LinkDB
All DBs
Position
2:complement(87624473..87627690)
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AA seq
788 aa
AA seq
DB search
MEEHSNHYAEAAIPQNVEGEVESEERDPESNSLIQPLLKRNRTLSSNPLALVGAKVSHIE
SLDYEINENDLFKHDWRSRSKVQVFQYVLLKWTLAWLIGLLTGLIATLINLAVENIAGYK
LLAVVAYIDEERYLMGFIFLAVTNLLFTAVAAVLCVCFAPTAAGPGIPEIKAYLNGVDTP
NMFGASTLIVKIVGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRVKWRWLRYM
NNDRDRRDLITCGAASGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAIVVVVLR
AFIEICSTGECGLFGEGGLIMFDVSTVTVTYRWMDIVPVVVIGIIGGVLGSLYNYFLHKV
LRLYNLINQKGKIHKILLSLVVSLFTSTCLYGLPFLAKCTPCDPSLTDSVCPTNGRSGNF
KQFNCPDGYYNDLATLLLTTNDDAVRNIFSTNTSTEYHPLNLLIFFALFCILGLFTFGIA
VPSGLFLPIILMGAAYGRMLGIAMKSYTDIDQGLYAVLGAASLMAGSMRMTVSLCVIFLE
LTNNLLLLPITMIVLLIAKTVGDCFNPSIYEIILHLKGLPFLDAHPEPWMRNLNVSELAD
AKPPVVTLRGIEKVERIVEVLRNTTHNGFPVVDDGVVPSVGLAVGATELHGLILRAHLVQ
VLKKKWFLKERRRTEEWEVREKFTAVELAEREGKIEEVAVTSGEMEMYVDLHPLTNTTPY
TVIESMSVAKAMVLFRQVGLRHLLILPKYEAAGVPPVVGILTRQDLIAYNILNAFPHLKN
PKGREKGN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacattcaaaccattatgcagaagcagcaattccccagaacgtggaaggagaa
gttgaatcggaagaaagagatccagaaagcaattcactgatccaaccactcctcaagaga
aacagaacactctcttccaatccactggctctggttggagccaaagtctcccacatcgag
agtctggactacgagatcaatgagaatgacctgtttaagcacgactggagaagcagatcc
aaggtccaagtcttccagtatgtattgttgaaatggacgcttgcctggctcattggactt
ctaaccggtctaattgccactctcatcaacctcgccgttgagaatattgcaggctacaag
cttcttgctgtggttgcttacatagatgaggaaaggtacctgatggggttcatcttttta
gctgtgacaaatcttctattcaccgcagttgccgctgttctctgcgtgtgtttcgcaccc
actgcagctggacctggtatacctgaaatcaaagcttatctaaacggagttgatactccc
aacatgtttggtgcctccacattgatcgtcaagatagttggaagcattggggccgtctct
gcaggtttagatctgggaaaagaaggacctctggtgcacataggaagctgcattgcttcc
ttactaggccaaggggggcctgacaattaccgtgttaaatggcgctggcttcgctacatg
aataacgaccgtgaccgccgggatctcattacctgtggggccgcctcaggggtctgtgca
gccttccgatcccctgtgggtggtgtactgtttgctcttgaagaggtggcaacatggtgg
aggagtgcccttctgtggagaacttttttcagcacagccattgtggtggtggtgctcagg
gcttttattgaaatatgcagcaccggggaatgtggcctttttggagaaggagggcttatc
atgtttgatgtcagcactgtaactgtgacataccgttggatggatattgtccctgttgtt
gtgattggcattattggtggcgttttgggaagcttgtacaattattttcttcacaaggtc
ctcagactgtacaatctcataaatcagaaggggaaaattcacaagatcctcctcagtctt
gtggtatcacttttcacctctacgtgcctatatggtcttcctttccttgccaaatgtaca
ccctgtgatccctcacttacagattctgtctgccccaccaatggacggtctggcaacttc
aaacagttcaactgcccagatggctactataatgacttggctactctactgcttaccact
aatgatgatgcagttcgaaacatcttctcaacaaacacttccactgaatatcacccactc
aacctcctaatcttctttgcactcttctgcatcttaggattgtttacctttggaattgct
gtgccgtctggcctgttcctccccatcatccttatgggtgcagcctatggccgcatgctt
ggtattgccatgaaatcgtacacagacattgaccagggactctacgctgttcttggtgca
gcttccctaatggcaggatcgatgaggatgactgtttcactatgtgtcatatttcttgag
ctgaccaacaatcttctcttactgcccataacaatgattgtccttctaattgccaaaact
gttggagactgtttcaacccaagcatctatgagattatactgcacttaaaaggtctacct
ttcttagatgcacatccagagccatggatgaggaatctgaatgtaagtgaacttgcagat
gccaagcctccagtagtcaccctccgtggaatcgaaaaggtggaacggattgtggaggtc
ctcagaaacaccacacataatggcttcccagttgtagatgatggagttgtgccatcagta
ggactagctgttggggcaacagaactacatggactaatactaagagctcaccttgtccag
gtgctgaagaagaagtggttcctaaaggaaaggagaagaacagaggagtgggaagtgaga
gagaagtttaccgcagttgaattagccgagagagaaggaaagattgaggaggtggctgtg
acaagtggtgaaatggagatgtatgtcgatctgcatccactcaccaatacgacaccttac
acagtgatcgaaagcatgtcggtggcaaaagctatggtgcttttcagacaagtgggactc
cgccatttgctcattctgccaaagtacgaggcagcaggggtgcctccagtggttgggatc
ttaaccaggcaggatttgatagcctacaacattttgaatgcctttcctcatctcaaaaat
cccaaaggcagagagaaggggaactga
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