KEGG   Rosa chinensis (China rose): 112187152
Entry
112187152         CDS       T06020                                 
Name
(RefSeq) UBP1-associated protein 2A isoform X2
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112187152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112187152
   03041 Spliceosome [BR:rcn03041]
    112187152
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112187152
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112187152
Spliceosome [BR:rcn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112187152
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 RRM_Nup35
Other DBs
NCBI-GeneID: 112187152
NCBI-ProteinID: XP_024181583
LinkDB
Position
2:28081041..28086773
AA seq 438 aa
MAKIQTTKKRRLVKTADKNLDKTPKAAKLEPKQEQEHEHEHNDDLRHKQPQTGSDSDSDS
DPETLSQLLEPYSKEQLISLITDAASNDSSLFKRIRDAADADVSHRKIFVHGLGWDTTRE
TLVSAFQPYGDVEDSNLVMDKLTGKTKGYGFVLFKTRRGALKALKEPKKSIGNRSASCQL
ASVGPGNNTGAPSSSSSGGQSDSAGRKIYVSGVPHEAEAEKLRVLFGRFGEIETGPMGFD
SQTGKSRGFALFLYKSVEGAKKALEEPVKVFEGHQLNCQKATEGSKNKNAVGPAQQQTQA
PPLATVPGAQNMAFFGQYPGLNPLYGGLMTNVGGALVPGSGNPAMMARPLNPGLLAGALN
PGVFPAGQYGQVGAGVGGFGGVSHGMGSFGGGGSLLGAYGSIAPLPAMQSLQHVYPSSQT
GQTATVRPQGSNGYQPYM
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggccaagatccaaaccaccaagaagcgcaggctcgtcaaaaccgccgacaaaaacctc
gacaaaacccccaaagccgcaaagctcgaaccaaaacaagaacaagaacacgaacacgaa
cacaacgacgacctccgccacaaacagccccaaacggggtcggactcggattcggactcc
gacccggagaccctgtcccagctgctggagccctactccaaggagcagctcatctccctc
ataaccgacgccgcctccaacgactcctccctcttcaaacgcatccgcgacgccgccgac
gccgacgtctcgcaccgcaagatattcgtccacggcctcggatgggacaccacccgcgaa
accctagtctccgccttccagccctacggcgacgttgaggactccaatctggtaatggac
aagctcaccggcaagaccaaaggctacggcttcgtcctcttcaagacccgccgcggcgcc
ctcaaggccttgaaggagcccaagaagagcatcggcaaccgcagcgcctcctgccagctg
gcctcggtgggcccggggaacaatacgggggcgccgtcttcgtcgtcgagtggcggccag
tcggactcggcggggaggaagatttacgtcagcggcgtgccgcatgaggccgaagccgag
aaattgagggttttgtttgggagatttggggaaattgagaccgggccgatggggttcgat
tcgcagaccggaaagtctagaggttttgctttgttcttgtacaagagtgtggaaggtgca
aagaaggcacttgaggaaccggtgaaggtgtttgaagggcaccaattgaactgccagaag
gccactgaggggtcaaagaacaagaatgccgtggggccggcacagcagcagacgcaggct
ccgccactggccacagtacccggggcgcagaatatggcgtttttcggacagtacccggga
ttgaatccgctgtatggtggattgatgaccaatgtaggaggtgcattggttcctgggtct
ggtaacccggctatgatggcccggccgttgaacccgggtttactggcgggggcattgaac
cctggtgtgtttccagctggacagtatggtcaggtgggtgctggtgttggtgggtttggt
ggtgtgtctcatgggatggggagtttcggtgggggaggctcgttgcttggcgcatacggg
tcaattgcaccgcttcctgcaatgcagagtctgcagcatgtttatccaagttcacagacg
gggcagacggctacagttaggcctcaggggagtaatgggtaccaaccgtatatgtga

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