Rosa chinensis (China rose): 112187176
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Entry
112187176 CDS
T06020
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X2
KO
K12897
transformer-2 protein
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112187176
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112187176
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112187176
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112187176
Spliceosome [BR:
rcn03041
]
Common components
Common spliceosomal components
SR proteins
112187176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
NMT_C
Motif
Other DBs
NCBI-GeneID:
112187176
NCBI-ProteinID:
XP_024181622
LinkDB
All DBs
Position
2:complement(10660803..10664282)
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AA seq
238 aa
AA seq
DB search
MADSPRRRYSRSPSPWRAQSRSRSRSRSMSRPRSRSRSWSRPRHRSRSRGRSRSRSRGRD
AVVNPGNTLYVTGLSQRVSEKDVERHFSKEGKVASCFLVVEPRSRISRGFAFVTMDSNED
AERCIKHLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKNTRDYARGDRDRDRDRGRYR
GGSGRDDYGYRRSPRRSPYRGGRDYSPRGSTYGGGRSRRERSYSPYGSPERKYTRGSR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctcgcagaaggtattcacgatccccttctccatggagagctcagtcc
agatccagatccaggtccaggtctatgtccaggcctaggtcaagatcaagatcctggtct
aggccgaggcacaggtctagaagtcgtggcaggtcaagatccagaagtcgtggaagggat
gctgttgtaaatcctggaaatacactctatgtgactggcctatctcaaagggtctctgaa
aaggacgttgaaaggcacttttcaaaggagggaaaggtagcttcatgttttcttgttgtt
gaacctcgttcgcgaatttcccgtggttttgccttcgttacaatggattctaatgaagat
gcggaacggtgcattaaacatctcaaccagtcagttctggaagggcgatacataactgtg
gaaaggtcccggaggaagcgaccaaggactccgacacctgggcattatctcggattgaaa
aatactagggactatgcccgtggtgaccgtgaccgtgaccgtgatcgtgggaggtaccgt
gggggctcgggtcgagatgactatggatataggaggtctcctagacgctcaccctacaga
ggtggtcgtgattattctcctaggggctcaacttatggtggtggaagatcaagaagggag
aggtcttattcaccctatggcagtccagaaaggaaatacactcgtggctctagatga
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integrated database retrieval system
