Rosa chinensis (China rose): 112187357
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Entry
112187357 CDS
T06020
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112187357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112187357
Membrane trafficking [BR:
rcn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112187357
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112187357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT_2
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
112187357
NCBI-ProteinID:
XP_024181884
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All DBs
Position
2:67744286..67750331
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AA seq
952 aa
AA seq
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MTEKSCTLLVHFDKGTPALANEIKEALEGNDVEAKIEALKQAIMLLLNGDTIPQLFITII
RYVLPSEDHTVQKLLLLYLEIIDKKDSRGKVLPEMILICQNLRNNLQSPNEYIRGVTLRF
LCRLNESEIIEPLIPSILANLEHRHPFVRRNAVSAVMSVYRLPHGEQMLVDAPEIIDRFL
ASEHDPSSKRNAFLMLFNCAQDRAVSYLFSHIDRIADWGEQLQMVVLELIRKVCRVNKGE
KGKYIKVIISLLNAQSSAVVYECANTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIV
LDRINELKSSHREILVELVMDVLRVLSSPNLDIRRKTLDIVLELITPRNIDEVVMMLKKE
VVKTQSGELEKNGEYRQMLVQAIYSCAVKFPEVASTVVHPLMDFLGDTNVASALDVAIFV
REIIETNPKLRVSIIMRLLDTFYQIRTSRVCTYALWIIGEYCLSLSEVESGIATIKQCLG
ELPFYTASEESEAQDVSKNSLVVSSSTVSSRRPVVLADGTYATQSAALETAMSAPLLVQG
SLVASVGNLRSLILSGDFFLESVVACTLTKLVLRLEEVQPSKVEVNKATTQALLIMVSML
QLGQSSALPHPIDNDSHDRIVLCIRLLCNKGEEVKMIWLKSCRESFVKMLEDKKHREAEE
TRAMAQISNAQPDDLIDFYHLKSKKGMSQLELEDEVQDDLKRATGEFLKDGDDTNKLNRI
LQLTGFSDPVYAEAYVTVNHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYT
LAPLSSKQIKSNIKVSSTETGVIFGNIVYETSSNVLERNVIVLNDIHIDIMDYISPASCA
DILFRTMWAEFEWENKVAVSTVIEDEKDFLNHIVKATNMKCLTPPSALEGECGVLAANLY
AKSVFGEDALVNVSVEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGSS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaagtcatgcacgctcctggtccacttcgacaagggcacgccggcccttgcc
aacgagatcaaagaagctctcgaaggaaacgacgtcgaagccaagatcgaagccctcaag
caagcaatcatgctcttgctcaacggcgacaccattccccagctcttcatcaccattatc
cgctacgtccttccctccgaggaccacaccgtccagaagcttctcctcctctacctcgag
atcattgacaagaaagactccagaggcaaggtcctgccggagatgatcctcatctgccag
aacctccgcaacaatctccagagccctaacgagtacatccgcggtgtcacgctccggttc
ctctgccggttgaacgagtccgagatcatcgagccgttgatcccttcgattctggccaac
ctggagcaccgccacccgttcgttcgacgaaacgccgtcagcgcagtcatgtctgtgtat
aggcttccgcacggtgagcaaatgctggtggatgcgccggagattatcgatcggttcttg
gcttccgagcatgatccttctagtaagcgaaacgcctttcttatgctgtttaattgtgcg
caggatagagccgtcagctatttgttttctcatatcgataggattgctgattggggcgag
cagctccaaatggttgtgttggaattgattaggaaggtttgtagagtcaataagggtgag
aaggggaagtacattaaggtcattatatcattgcttaatgctcagtccagtgctgttgtt
tacgagtgtgccaatacgctcgtgtccttgtcgtctgccccgactgcgattcgggccgca
gccaatacgtattgtcagttgttattatcacagagtgataacaatgtcaagttgattgtg
ctcgataggattaatgagcttaagtcttcgcatagggagattctggttgaattggttatg
gatgtgctgagggtactttcaagtccaaatcttgatattaggaggaaaacacttgatatt
gttcttgagttgattactccgagaaatattgatgaggttgtgatgatgttgaagaaggag
gtcgtcaagactcagagtggtgagcttgagaagaatggggaatacaggcagatgctggtg
caagctatatattcatgtgcggttaagtttccagaggtggcgagcacagtggtgcatcct
ttgatggatttcttgggcgatactaatgtggcttcagccttggatgtggctatttttgtg
cgtgagataattgaaaccaatcccaagttgcgtgtttcaataataatgagactgttggac
actttctaccagattcggacttccagggtgtgtacttatgctctttggattattggggag
tattgtctgtcactttctgaggttgagagtgggattgcaaccattaagcagtgtcttggg
gagctcccattttacaccgcttctgaggaaagcgaggcgcaagatgtttcaaagaattct
ctggttgtaagctcgtcgactgtctcttccagaagacctgtggttcttgcagatgggacc
tatgctacccagtctgctgcactggaaactgctatgtctgcacctctccttgttcaagga
tcattggtggcttctgtagggaacttgagatcgttgattctctctggtgactttttcctc
gagtcagttgtagcatgcacgctgacaaagcttgttttgagattagaagaggttcagcct
tcaaaagttgaagtgaacaaggcaactacacaagctttgttaatcatggtctctatgctt
caactgggtcaatcatcggcccttccacatccaattgataatgattctcatgatagaatt
gttctttgcatccgtttactatgcaataaaggtgaagaagtaaagatgatatggttgaaa
tcttgtcgagagagttttgttaaaatgcttgaagataagaagcaccgggaagcagaggag
actagagccatggctcagatatcaaatgcacagccggatgacctaattgatttctaccat
ctaaagagcaaaaagggtatgagccaacttgagttagaagatgaggtccaagatgatctc
aaacgtgccactggagagtttctcaaggatggagatgacacaaataaactcaaccgcatt
ctgcagctcacaggattcagcgatcctgtttatgctgaagcctatgttacagtcaatcat
tatgacattgttcttgatgttaccgtcatcaatcgaacaaaggaaacccttcagaatttg
tgcttggagttggccacgatgggcgatctcaaacttgttgagcgtcctcagaactataca
ctagctccgctatcaagcaaacagataaagtcaaacattaaggtctcttcaactgaaaca
ggagttatatttggtaacattgtatatgagacatcttcaaatgtgcttgaaagaaacgtt
attgtacttaatgacatccatattgatataatggattacatctctcctgcatcatgtgct
gatatattattccggacaatgtgggctgagtttgagtgggagaataaggttgctgtaagc
actgttatcgaagacgagaaggactttctgaaccacattgttaaagcaactaacatgaag
tgcctgactccaccgtcggcactggaaggagagtgtggagtccttgctgctaatctgtat
gcaaagagtgtttttggggaggatgctttggtgaatgtgagtgttgagaaacaagcagat
ggtaagctaagtggatacatcagaattagaagcaagactcagggtattgccctaagtctt
ggggacaagatcaccttgaaacagaagggcagctcttga
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