Rosa chinensis (China rose): 112187358
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Entry
112187358 CDS
T06020
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112187358
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112187358
Membrane trafficking [BR:
rcn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112187358
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112187358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
112187358
NCBI-ProteinID:
XP_024181885
LinkDB
All DBs
Position
2:67751904..67757298
Genome browser
AA seq
949 aa
AA seq
DB search
MEKSCTLLVHFDKGTPALANEIKEALEGNDVEAKIEAMKKAIMILLNGDTIPQLFITIIR
YVLPSEDHTVQKLLLLYLEIIDKTDSRGKVLPEMILICQNLRNNLQSPNEYIRGVTLRFL
CRLNEAEIVEPLIPSILANLEHRHPFVRRNAVSAVMSVYRLPQGEQLLVDAPEIIDRFLA
SEQDPSSKRNAFLMLFNCAQDRAVSYLFTHVDRIIDWAEQLQMVVLELIRKVCRVNKGEK
GKYIKVIISLLNAQSSAVVYECANTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRINELKASHREILVELVMDVLRAVSSPNLDIRRKTLDIVLDLITPGNIDEVVMMLKKEV
VKTQGAELEKNGEYRQMLVQAIYSCAVKFPAVASTVVHPLMDFLGDTNLASAMDVAIFVR
EIIETNPKLRVSIITRLLDTFYQIRTSRVCTYALWIIGEYCLSLSEVESGIATIKQCLGE
LPFYTASEESEAQDVSKNSQVVNSSTVSSRRPVVLADGTYATQSAALETAMSAPVLVQGS
LASVGNLRSLILSGDFFLESVVACTLTKLVLRLDEVQPSKVEVNKATTQALLIMVSMLQL
GQSSVLPHPIDNDSQDRIVLCIRTLCNKDEEVKKIWLKSCRESFVKMLEDKKLREIEESR
AMAQISNAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKDGDDANKLNRILQ
LTGFSDPVYAEAYVTVNHYDIVLDVTVINRTKGTLQNLCLELATMGDLKLVERPQNYTLA
PESTKQIKANIKVSSTETGVIFGNIVYETSNVLERTVIVLNDIHIDIMDYISPSSCADVL
FRTMWAEFEWENKVAISTVIKDEKDFLNHIVKATNMKCLTPPSALEGECGVLAANLYAKS
VFGEDALVNVSVEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGP
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcatgcacgctgctggtccacttcgacaagggcacgccggccctggccaac
gagatcaaggaagctctggaaggaaacgacgtggaagccaagatcgaagccatgaagaag
gcaatcatgatcttgctcaacggcgacacaattccccagctcttcatcaccattatccgc
tacgtcctcccctccgaggaccacaccgtccagaagcttctcctcctctacctcgagatc
attgacaagacagattcccgaggcaaggttctcccggagatgatcctcatctgccagaac
ctccgcaacaatctccagagccctaacgagtacatccgcggcgtcacgctccgattcctc
tgccggttgaacgaggccgagatcgtcgagccgttgattccgtcgattctggcgaatctg
gagcaccgccacccgttcgttcgacggaacgccgtcagcgcagtcatgtctgtgtatagg
cttccgcagggtgagcagttgctggtggatgcgccggagattatcgatcggttcttggcc
tccgagcaagacccgtccagtaagagaaacgctttccttatgctctttaattgcgcgcaa
gatagagctgttagttatctgtttactcatgtcgataggattattgattgggctgagcag
ctccagatggttgtgttggaattgattaggaaggtttgtagagtcaataagggtgagaag
gggaagtacattaaggtcattatatcattgcttaatgctcagtccagtgctgttgtttac
gagtgtgccaatacgctcgtgtccttgtcgtctgcccccactgcaattcgagctgcagcc
aatacttactgtcagttgttgttgtcgcagagcgacaacaatgtgaagttgattgtgctt
gataggattaatgagcttaaggcttcgcatagggagattttggttgagttggttatggat
gtgctcagggccgtgtcgagtccaaatcttgatattagaaggaagactcttgatattgtg
cttgacttgattactcctgggaatattgatgaggttgtgatgatgttgaagaaggaggtc
gtcaagactcagggtgctgagcttgagaagaacggggaatacaggcagatgctggtgcaa
gcaatatattcatgtgcagttaagtttcctgcggtggcgagcacggtggtccatccattg
atggatttcttgggggataccaatctggcctcagctatggatgtggctatttttgtgcgt
gagattattgaaaccaaccccaagttgcgtgtctctataattacaaggctgttggatact
ttctaccagatacggacttcaagggtgtgtacttatgctctttggattattggggagtac
tgtctctcactttctgaggttgagagtgggattgcaaccattaagcagtgtctaggggag
ctcccattttacaccgcttctgaggaaagcgaggcacaagatgtttcgaagaattctcag
gtggtaaactcatctactgtgtcttccaggagacctgtagtgcttgcagatgggacctat
gctacccagtctgctgcactggaaactgctatgtctgcacctgtccttgttcaaggatct
ttggcttctgtaggcaacttgagatcgttgattctctcaggtgactttttcctggagtcc
gttgtggcttgcactttaacaaagcttgttttgagactagatgaggtccagccttctaaa
gttgaagttaacaaggcaaccacacaggctttgttgatcatggtgtctatgctgcaactg
ggtcaatcatcagtccttccgcatccaattgataatgattctcaagacagaattgttctt
tgcatccgtacactatgcaataaagatgaagaagtgaagaagatatggttaaagtcttgt
agagagagctttgttaaaatgcttgaagataagaagcttcgggaaatagaggaaagtaga
gctatggcgcagatatcaaatgcacaaccagatgaccttattgatttctaccatcttaag
agcagaaagggtatgagccagcttgagttggaagatgaggttcaagatgatctcaaacgt
gctactggagagtttgtaaaggatggagatgatgcaaataaactcaaccgcattcttcag
ctcacaggattcagcgatcctgtttatgccgaagcctatgttacagttaatcattatgac
attgttctcgatgttaccgtcatcaaccgaaccaagggaacgcttcagaatttatgcttg
gagttggccacgatgggcgatcttaaacttgttgagcgtcctcagaactatacactagct
ccagaatcaaccaaacagataaaggcaaacattaaggtctcctcaactgaaacaggagtt
atatttggaaacattgtttatgagacgtcaaatgtgcttgagagaacagttattgttctt
aatgacatccatattgatataatggattacatctctccttcttcatgtgctgatgtgttg
tttcggacaatgtgggctgagtttgaatgggaaaataaggttgctataagtactgttatc
aaagacgagaaggactttctgaatcacatcgttaaagcaactaacatgaagtgcctgact
ccaccatcggcactggaaggagagtgtggagtcctcgctgccaatctgtatgcaaagagt
gttttcggggaggatgctttggtgaatgtgagtgttgagaaacaagcagatggtaagcta
agtggatacatcagaattagaagcaagactcaaggtattgcactgagtcttggggacaag
atcaccttgaaacagaagggcggcccttga
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