KEGG   Rosa chinensis (China rose): 112187416
Entry
112187416         CDS       T06020                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
  KO
K10663  E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112187416
Enzymes [BR:rcn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112187416
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    112187416
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_5 zf-ANAPC11 zf-RING_UBOX zf-RING_16 zf-C3HC4_3 MaAIMP_sms zf-RING-like zf-RING_4
Other DBs
NCBI-GeneID: 112187416
NCBI-ProteinID: XP_024181952
LinkDB
Position
2:complement(82724479..82725617)
AA seq 250 aa
MSSPAIVLLILFILVVAASLLLYYLRRSQPVRHSANAPVPLQHSQSRRRQVSPAPSSSGL
LLLLPRFKFSDLKRPGSVTVGGDCAICLAEFEPQHQLRLLPLCLHAFHVDCIDTWLAGES
LICPVCRAVVFRSDSDLLLQTASSAGGSFRLAIGNVSSGRRQDNSRSSRTHSIRGGEFEY
VVDEEWELQLRDAIHDVEGEDGEIVAVVIDSQPPPSTVEYQSSCGMIFTGSSRRWTELSE
GLETIYRWLS
NT seq 753 nt   +upstreamnt  +downstreamnt
atgtcatcgccggcgattgtgctcctcatcctcttcatcctggtcgtcgctgcttcactc
ctcctctactacctccgccgatcacaacctgtccgtcactccgccaacgcccccgtgccg
ctgcagcactcacagtctcgccgccggcaagtctctcctgcaccttcctcctccggcctc
ctcctcctcctcccgcggttcaaattctccgacctgaaacgccctggctccgtcaccgtc
ggcggagactgcgcgatttgcctggcggagttcgagccgcagcaccagctccgcctcctc
cctctctgcctccatgccttccacgtagattgcatcgacacctggctcgccggcgagtcg
ctgatttgtccagtttgccgcgccgtggtcttccggtccgactcggacctcctcctccag
acagcctcctccgccggcggaagcttccggctggcgatcggcaacgtcagcagcggccgg
cgtcaggacaattcgaggagctcgcgaactcactcaattcgcggaggtgaattcgagtat
gttgtggatgaggaatgggagcttcaactcagagatgcgattcacgacgtcgaaggcgag
gacggcgagatcgtcgccgtcgttatcgacagccaacctccgccgtctacggtggagtat
caaagctcctgcggcatgattttcacagggagcagccgtcgttggacggagctatccgag
ggactggaaacgatttaccggtggctctcctga

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