Rosa chinensis (China rose): 112187419
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Entry
112187419 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112187419
KO
K10756
replication factor C subunit 3/5
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03030
DNA replication
rcn03410
Base excision repair
rcn03420
Nucleotide excision repair
rcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112187419
03410 Base excision repair
112187419
03420 Nucleotide excision repair
112187419
03430 Mismatch repair
112187419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcn03032
]
112187419
03036 Chromosome and associated proteins [BR:
rcn03036
]
112187419
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112187419
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112187419
DNA Replication Termination Factors
ELG1-RFC complex
112187419
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112187419
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112187419
Check point factors
HRAD17(Rad24)-RFC complex
112187419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
AAA_16
TIP49
Resolvase
AAA_5
Toprim
RuvB_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
112187419
NCBI-ProteinID:
XP_024181957
LinkDB
All DBs
Position
2:complement(12817850..12821647)
Genome browser
AA seq
812 aa
AA seq
DB search
MENHFSRHSRTSQTSLKTRRSGYEPSDNETDFLETPWHGHNRKISGGLESEVTKAAGLEL
ARNISPFKHSRRHASRFEYDASSARNDAVVSPVRRRTSSKSPYKQRREDGTVCSPIAGVE
TRRNISPLSKAERRRGASPLKPEKEGHDVNDADQIVNSNRKQSQRRPGRDPQSRRSSTAP
RVRARSEVEKKGNYSATPTKGERTPSPLSKALVLTTPTARERTPSPLSKAPVLTTPTARE
RTPSPISKGLIQQQRQHTKSPSVGEINEMIANAKLARTPLEANSPLAFGSSESFAPGDIF
FSRECKILALPKTVNPTPKPKNALPKTVNPIPKPKNGSGFENRLISPNVKMVTPRGNGFD
QNARGTPLSYNLSQTTTTTSSSALSRQSSKMSGTSGSTTASAKKFTANRKKSESHSLFAC
MRKGGSCRKTKSPEHSPVFNEASFIQKAFVDESLRQFWADNHRPASLNGFTCHMQEAQLL
KDLVIDNKFPHILLSGPPGSGKKALTMAFLREIYGDASWEISHDLRCFQIQEQMSMQVMV
PLTSSAHHIELNVRVEANARYALMGLVKEINSENDIAPEISTINLKGNHKVLVLYDVDRA
AEHIQHLIKWIMDCYSEACKLILCCENDEDIVESVKNRCTVIKLDAPVTQEITEVLAQIA
RKENFDLPTNFANKIANKSKQNLRKAIMGLEATKAHNYPFVDNQPIPIGWEEVLVEVAAE
ILADPSPKRLFFIRGKFQKLLVGFVHPKLILMKLVEQFLKAMDGSSKRDLYYWHAYYEKR
LPEGASALLKLEEFVAKFMSIYRKSANSRQYV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcacttttcaaggcatagcagaacttctcagacctcactgaagacccggcgc
agtggttatgaaccatctgacaacgagactgatttcctagaaacgccgtggcatggccac
aataggaagatcagtggaggcttagaatctgaggtgacaaaagctgcagggttggagttg
gcaagaaacattagccctttcaaacatagccggaggcacgcttccaggtttgaatatgat
gcttcttctgcaagaaatgatgcagtagtaagcccggtccgaagaagaaccagcagtaag
tcaccatacaagcaaagaagagaagatggtactgtttgttcaccaatagcaggtgttgaa
actcgcagaaatatcagtcccttgtcaaaagctgagcgcagaagaggtgcttctcctttg
aaaccagaaaaagaagggcatgatgtgaatgatgctgatcaaattgtgaactcaaacagg
aaacaaagccaaagaaggcccggtagagacccccaaagcagaagatcatctactgccccg
agagttcgagcaagatcagaagtagaaaaaaaaggcaactatagtgcaacaccaactaaa
ggtgaaagaacaccatcaccattgtcaaaggccctggtattaacaacaccaactgcaagg
gagagaacaccatcaccattgtcaaaggccccggtattaacaacaccaactgcaagggag
agaacaccatccccaatctcaaaagggttgatccagcaacaaagacaacacacaaaatcg
ccgtctgttggtgagatcaatgagatgattgccaatgcaaagcttgctagaactcctttg
gaggctaattctccattagctttcggaagttcagagtcttttgcaccaggtgatatcttc
ttctctcgtgagtgcaaaatcttggcactgcccaaaactgtcaatcccacaccaaaacca
aagaatgcactgcccaaaactgtcaatcccataccaaaaccaaagaatggtagtggtttt
gagaaccgcttaattagtcctaatgtcaaaatggttaccccaagaggaaatggtttcgat
cagaatgctcgagggactccattaagctataatttgtcacagacaaccacaacaacatca
agctcagcattgagcaggcaaagcagtaagatgagtggtacaagtgggagcacaactgct
agtgccaagaaattcacagcaaatagaaagaaaagtgagagtcactcactgtttgcttgt
atgagaaagggagggtcttgtcggaaaacaaaatcacctgagcattctcctgttttcaat
gaagcttcatttatacagaaggcatttgtggatgaaagtcttaggcagttttgggctgat
aaccatcgaccggcttcgttgaatggattcacttgccacatgcaagaagctcaacttctc
aaggatctggtaattgacaataaatttccccacattttgttatctggaccacctggttct
gggaaaaaagctctaacaatggctttcttaagagagatatatggtgatgcaagctgggaa
atatctcatgatttaagatgcttccagattcaggaacaaatgtcgatgcaagtaatggtt
ccattgacatccagtgctcaccatatagagcttaatgtccgtgttgaagcaaatgctaga
tatgcattgatgggtttagtaaaggaaatcaacagtgagaatgacattgctcctgaaatc
agcactattaatctcaagggaaatcataaagtgctagttctctacgatgttgaccgagca
gcagaacatattcagcatttgatcaaatggataatggactgttactcagaagcttgtaaa
ctcattctctgctgtgaaaatgatgaagacatcgttgaatcagtgaaaaaccggtgcaca
gttatcaagcttgatgctcctgtgactcaagaaattacggaagttcttgctcagatagca
aggaaggaaaactttgacctacctacgaacttcgctaataagattgctaacaaatctaag
cagaacctgagaaaagcaatcatgggccttgaagcgaccaaagcacacaactatcctttt
gtagataaccaaccaattccaattggatgggaagaggtacttgttgaagttgctgcagaa
atcctagctgacccatcaccaaagaggttatttttcatccggggaaagtttcaaaagctt
cttgtgggttttgtacacccgaaactgattctaatgaagctggtagaacagttccttaaa
gcaatggatggtagttctaaaagggacctatattattggcatgcttactatgagaaaaga
ctcccagaaggagcaagtgctttactaaaactagaagaatttgtggctaagttcatgagc
atataccgaaagagtgccaacagtcgtcagtatgtgtag
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