Rosa chinensis (China rose): 112187448
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Entry
112187448 CDS
T06020
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112187448
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112187448
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112187448
03036 Chromosome and associated proteins [BR:
rcn03036
]
112187448
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112187448
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112187448
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112187448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
112187448
NCBI-ProteinID:
XP_024182005
LinkDB
All DBs
Position
2:complement(60086401..60093430)
Genome browser
AA seq
517 aa
AA seq
DB search
MNGGDEVVAAAPGGPPPAPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDR
GGRVVLFERTDTKDHGGSSRRDLERMDYSVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK
INKIRWCQTANGALFLLSTNDKTIKFWKVQEKKVRKVSEMNVDPLKTVANGSVASSSSLS
SPKTHLANGGCQSFSSLSNDISFPPGGIPSLRLPQVVTSHETSLVARCRRVYAHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPTNMEDLTEVITSAEFHPTHCN
TLAYSSSKGSIRLIDLRQSALCDSHAKLFEEQEAPGARSFFTEIIASISDIKFAKDGRYI
LSRDYMTLKLWDINMDSGPVTTFQVHEYLRPRLCDLYENDSIFDKFECCLSGDGLRVATG
SYSNLFRVFGCGSGSNEATTLEASKNPMRRQVQTPSRPSRSLSSSITRVVRRGAESPGVD
ANGNCFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatgaggtcgtcgcagcagctccggggggccctccaccggcgcctctc
gattggaaattctctcaggtcttcggcgagcgtaccgccggtgaagaagtacaggaagtg
gacattatttctgctattgaattcgataaaactggtgaccatcttgctactggcgacaga
gggggccgggtggttctttttgagaggacagatacaaaagatcatggtggctcctccaga
agggatttagaaaggatggattattcagtcagtaggcaccctgagttccgttacaaaaca
gagtttcagagccatgagcctgagtttgactatctgaagagtttggaaatagaggagaaa
attaacaaaatcagatggtgccaaacagcaaatggtgccctgtttctcctatctactaat
gacaagacaattaaattttggaaggtccaagaaaagaaggtcaggaaagtttctgagatg
aatgtggatcctttgaaaactgtagcaaatggcagtgttgctagttcaagcagtttgagt
agtcctaaaacgcatcttgcaaatgggggatgccagtctttcagttctcttagcaatgac
atttcatttccaccgggggggattccttcgctgcgactgccacaggtagtaactagccat
gagactagcctggtcgctagatgtcgaagagtatatgctcatgctcatgattatcatatc
aattcaatttcaaacaacagtgatggtgaaacttttatatcagctgatgatctgcgaata
aatctttggaacttggaaattagcagtcaaagtttcaatattgttgatgtgaagcctaca
aacatggaagatttaactgaggtgataacatcagcagagttccaccccacccattgcaat
acgttagcctatagcagttccaaaggctcaattcgactaattgatttgcggcagtctgct
ttgtgtgattctcatgctaaattgtttgaggaacaggaggcacctggtgctagatcattc
ttcacagagattattgcttcaatctcagatattaagtttgcaaaggatggtagatatata
cttagccgcgattacatgactcttaagttatgggacatcaatatggattcaggtccagtc
acaaccttccaggttcatgaatatttaagacctaggctgtgtgatttatatgagaacgat
tctatcttcgataaattcgagtgttgtcttagtggtgatggattgcgagtagcaacaggt
tcttacagcaatctattccgtgtctttggttgtggctctggtagtaatgaggcgacaact
ttggaagcgagtaaaaatccaatgaggcgacaagttcagactccttctagaccttccagg
tcgctcagcagtagtataacacgagttgtcagacgaggagcagaaagccccggggttgat
gccaatggaaactgttttgatttcacaacaaagttgctgcacttagcatggcatccaact
gaaaattcaatagcctgtgctgctgcgaacagcttgtacatgtactatgcgtaa
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